Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 SLC25A3P1-201ENST00000443844 931 ntBASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 ECEL1P2-202ENST00000465689 757 ntBASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM62Q9BVG3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 RCC2P3-201ENST00000418112 1537 ntBASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 AL023284.2-201ENST00000405850 579 ntBASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 LIN28AP1-201ENST00000429574 405 ntBASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 MIR3180-5-201ENST00000583743 153 ntBASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 AC008622.2-201ENST00000617006 1229 ntBASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM62Q9BVG3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 AC113347.1-201ENST00000413321 391 ntBASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM62Q9BVG3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 GPAT2P1-201ENST00000444924 1672 ntBASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 AP000523.1-201ENST00000398242 1049 ntBASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM62Q9BVG3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms