Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 AL353719.1-201ENST00000566847 864 ntBASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 AC145285.6-201ENST00000604632 637 ntBASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 AC097493.4-201ENST00000641197 219 ntBASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCM2Q9BSQ5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.58■□□□□ 0.57
CCM2Q9BSQ5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.58■□□□□ 0.57
CCM2Q9BSQ5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCM2Q9BSQ5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCM2Q9BSQ5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCM2Q9BSQ5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.58■□□□□ 0.57
CCM2Q9BSQ5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.58■□□□□ 0.57
CCM2Q9BSQ5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 AC098818.2-201ENST00000564925 2320 ntBASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 BX323043.1-201ENST00000641006 1765 ntBASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCM2Q9BSQ5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 AC012306.2-201ENST00000609350 630 ntBASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCM2Q9BSQ5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 AC008622.2-201ENST00000617006 1229 ntBASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 AC010653.2-201ENST00000623505 997 ntBASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 AC092338.2-201ENST00000568827 1415 ntBASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCM2Q9BSQ5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms