Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.22■□□□□ 0.19
NICN1Q9BSH3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 AL121832.2-201ENST00000610979 668 ntBASIC16.22■□□□□ 0.19
NICN1Q9BSH3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NICN1Q9BSH3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 AC083906.6-201ENST00000641366 219 ntBASIC16.21■□□□□ 0.19
NICN1Q9BSH3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NICN1Q9BSH3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.21■□□□□ 0.18
NICN1Q9BSH3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NICN1Q9BSH3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.21■□□□□ 0.18
NICN1Q9BSH3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 PCDHB18P-201ENST00000524813 2368 ntBASIC16.2■□□□□ 0.18
NICN1Q9BSH3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.2■□□□□ 0.18
NICN1Q9BSH3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.2■□□□□ 0.18
NICN1Q9BSH3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms