Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.92■□□□□ 0.94
BPIFA3Q9BQP9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BPIFA3Q9BQP9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
BPIFA3Q9BQP9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
BPIFA3Q9BQP9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BPIFA3Q9BQP9 ESPNP-201ENST00000270691 2015 ntBASIC20.92■□□□□ 0.94
BPIFA3Q9BQP9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BPIFA3Q9BQP9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 POU5F1P3-201ENST00000428824 1078 ntBASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 AC006970.2-201ENST00000450065 779 ntBASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 MYC-208ENST00000641036 567 ntBASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BPIFA3Q9BQP9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 SLC25A6P5-201ENST00000435663 894 ntBASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 NCF1B-203ENST00000435988 1254 ntBASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.9■□□□□ 0.94
BPIFA3Q9BQP9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
BPIFA3Q9BQP9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
BPIFA3Q9BQP9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.89■□□□□ 0.94
BPIFA3Q9BQP9 AC135776.1-201ENST00000319817 2481 ntBASIC20.89■□□□□ 0.94
BPIFA3Q9BQP9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BPIFA3Q9BQP9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.89■□□□□ 0.94
BPIFA3Q9BQP9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
BPIFA3Q9BQP9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
BPIFA3Q9BQP9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 AL137784.2-201ENST00000607332 1000 ntBASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BPIFA3Q9BQP9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 KRT8P45-201ENST00000414328 1447 ntBASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 AC112777.1-201ENST00000540175 1423 ntBASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.88■□□□□ 0.93
BPIFA3Q9BQP9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms