Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VGLL1Q99990 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.33□□□□□ -0.12
VGLL1Q99990 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VGLL1Q99990 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.33□□□□□ -0.12
VGLL1Q99990 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.33□□□□□ -0.12
VGLL1Q99990 AC097658.1-201ENST00000475555 843 ntBASIC14.33□□□□□ -0.12
VGLL1Q99990 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.33□□□□□ -0.12
VGLL1Q99990 PNMA6B-201ENST00000538162 1200 ntBASIC14.33□□□□□ -0.12
VGLL1Q99990 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.33□□□□□ -0.12
VGLL1Q99990 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.33□□□□□ -0.12
VGLL1Q99990 AC120498.8-201ENST00000614275 531 ntBASIC14.33□□□□□ -0.12
VGLL1Q99990 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
VGLL1Q99990 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VGLL1Q99990 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VGLL1Q99990 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.33□□□□□ -0.12
VGLL1Q99990 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.33□□□□□ -0.12
VGLL1Q99990 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
VGLL1Q99990 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.32□□□□□ -0.12
VGLL1Q99990 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 GUSBP6-202ENST00000438529 1198 ntBASIC14.32□□□□□ -0.12
VGLL1Q99990 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.32□□□□□ -0.12
VGLL1Q99990 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.32□□□□□ -0.12
VGLL1Q99990 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
VGLL1Q99990 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.32□□□□□ -0.12
VGLL1Q99990 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.32□□□□□ -0.12
VGLL1Q99990 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.32□□□□□ -0.12
VGLL1Q99990 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 MIR4758-201ENST00000577688 71 ntBASIC14.32□□□□□ -0.12
VGLL1Q99990 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.32□□□□□ -0.12
VGLL1Q99990 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.32□□□□□ -0.12
VGLL1Q99990 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
VGLL1Q99990 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.32□□□□□ -0.12
VGLL1Q99990 ANO7L1-203ENST00000602586 1720 ntBASIC14.32□□□□□ -0.12
VGLL1Q99990 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
VGLL1Q99990 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VGLL1Q99990 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VGLL1Q99990 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VGLL1Q99990 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.31□□□□□ -0.12
VGLL1Q99990 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
VGLL1Q99990 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VGLL1Q99990 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VGLL1Q99990 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.31□□□□□ -0.12
VGLL1Q99990 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.31□□□□□ -0.12
VGLL1Q99990 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.31□□□□□ -0.12
VGLL1Q99990 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.31□□□□□ -0.12
VGLL1Q99990 TSPY6P-201ENST00000448518 926 ntBASIC14.31□□□□□ -0.12
VGLL1Q99990 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.31□□□□□ -0.12
VGLL1Q99990 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.31□□□□□ -0.12
VGLL1Q99990 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.31□□□□□ -0.12
VGLL1Q99990 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.31□□□□□ -0.12
VGLL1Q99990 AC060766.5-201ENST00000590539 871 ntBASIC14.31□□□□□ -0.12
VGLL1Q99990 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.31□□□□□ -0.12
VGLL1Q99990 AL121829.2-201ENST00000620908 328 ntBASIC14.31□□□□□ -0.12
VGLL1Q99990 MYC-209ENST00000641252 345 ntBASIC14.31□□□□□ -0.12
VGLL1Q99990 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VGLL1Q99990 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.31□□□□□ -0.12
VGLL1Q99990 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms