Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SAPCD2P3-201ENST00000455031 850 ntBASIC15.89■□□□□ 0.13
FOXC2Q99958 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.89■□□□□ 0.13
FOXC2Q99958 SEC1P-202ENST00000473944 940 ntBASIC15.89■□□□□ 0.13
FOXC2Q99958 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.89■□□□□ 0.13
FOXC2Q99958 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.89■□□□□ 0.13
FOXC2Q99958 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.89■□□□□ 0.13
FOXC2Q99958 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
FOXC2Q99958 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.89■□□□□ 0.13
FOXC2Q99958 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXC2Q99958 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 AC007225.1-201ENST00000566331 1836 ntBASIC15.89■□□□□ 0.13
FOXC2Q99958 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
FOXC2Q99958 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
FOXC2Q99958 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
FOXC2Q99958 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
FOXC2Q99958 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
FOXC2Q99958 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXC2Q99958 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXC2Q99958 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXC2Q99958 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.88■□□□□ 0.13
FOXC2Q99958 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
FOXC2Q99958 RNF126P1-202ENST00000569893 925 ntBASIC15.88■□□□□ 0.13
FOXC2Q99958 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
FOXC2Q99958 Z69720.1-201ENST00000601483 472 ntBASIC15.88■□□□□ 0.13
FOXC2Q99958 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
FOXC2Q99958 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXC2Q99958 AL157888.1-201ENST00000631930 593 ntBASIC15.88■□□□□ 0.13
FOXC2Q99958 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 AC026310.3-201ENST00000625186 2373 ntBASIC15.88■□□□□ 0.13
FOXC2Q99958 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXC2Q99958 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXC2Q99958 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXC2Q99958 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
FOXC2Q99958 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXC2Q99958 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
FOXC2Q99958 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXC2Q99958 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXC2Q99958 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
FOXC2Q99958 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXC2Q99958 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXC2Q99958 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.87■□□□□ 0.13
FOXC2Q99958 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
FOXC2Q99958 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXC2Q99958 MIR3917-201ENST00000580971 93 ntBASIC15.87■□□□□ 0.13
FOXC2Q99958 AC099336.1-202ENST00000602961 463 ntBASIC15.87■□□□□ 0.13
FOXC2Q99958 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
FOXC2Q99958 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXC2Q99958 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
FOXC2Q99958 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
FOXC2Q99958 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.87■□□□□ 0.13
FOXC2Q99958 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
FOXC2Q99958 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXC2Q99958 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXC2Q99958 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
FOXC2Q99958 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
FOXC2Q99958 AC006128.1-201ENST00000624704 1661 ntBASIC15.86■□□□□ 0.13
FOXC2Q99958 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
FOXC2Q99958 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXC2Q99958 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXC2Q99958 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms