Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS2Q99743 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.5■□□□□ 0.55
NPAS2Q99743 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NPAS2Q99743 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.49■□□□□ 0.55
NPAS2Q99743 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NPAS2Q99743 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.49■□□□□ 0.55
NPAS2Q99743 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.49■□□□□ 0.55
NPAS2Q99743 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.49■□□□□ 0.55
NPAS2Q99743 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.49■□□□□ 0.55
NPAS2Q99743 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.49■□□□□ 0.55
NPAS2Q99743 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
NPAS2Q99743 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NPAS2Q99743 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.49■□□□□ 0.55
NPAS2Q99743 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 SDHAP1-207ENST00000440850 2000 ntBASIC18.49■□□□□ 0.55
NPAS2Q99743 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.49■□□□□ 0.55
NPAS2Q99743 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.49■□□□□ 0.55
NPAS2Q99743 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPAS2Q99743 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 KRASP1-201ENST00000407852 552 ntBASIC18.48■□□□□ 0.55
NPAS2Q99743 AC239809.2-201ENST00000415381 517 ntBASIC18.48■□□□□ 0.55
NPAS2Q99743 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NPAS2Q99743 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.48■□□□□ 0.55
NPAS2Q99743 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.48■□□□□ 0.55
NPAS2Q99743 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NPAS2Q99743 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.48■□□□□ 0.55
NPAS2Q99743 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.48■□□□□ 0.55
NPAS2Q99743 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS2Q99743 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.47■□□□□ 0.55
NPAS2Q99743 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NPAS2Q99743 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NPAS2Q99743 TFP1-202ENST00000475455 1573 ntBASIC18.47■□□□□ 0.55
NPAS2Q99743 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NPAS2Q99743 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS2Q99743 IRX1P1-201ENST00000438849 1838 ntBASIC18.47■□□□□ 0.55
NPAS2Q99743 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NPAS2Q99743 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.47■□□□□ 0.55
NPAS2Q99743 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS2Q99743 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS2Q99743 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NPAS2Q99743 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.47■□□□□ 0.55
NPAS2Q99743 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS2Q99743 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.47■□□□□ 0.55
NPAS2Q99743 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.47■□□□□ 0.55
NPAS2Q99743 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.47■□□□□ 0.55
NPAS2Q99743 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NPAS2Q99743 NOC2LP1-202ENST00000452600 2235 ntBASIC18.47■□□□□ 0.55
NPAS2Q99743 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS2Q99743 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
NPAS2Q99743 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NPAS2Q99743 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.47■□□□□ 0.55
NPAS2Q99743 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.47■□□□□ 0.55
NPAS2Q99743 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.47■□□□□ 0.55
NPAS2Q99743 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS2Q99743 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS2Q99743 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS2Q99743 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS2Q99743 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS2Q99743 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS2Q99743 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS2Q99743 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS2Q99743 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS2Q99743 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NPAS2Q99743 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS2Q99743 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS2Q99743 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NPAS2Q99743 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS2Q99743 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NPAS2Q99743 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
NPAS2Q99743 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
NPAS2Q99743 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS2Q99743 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS2Q99743 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS2Q99743 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS2Q99743 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS2Q99743 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS2Q99743 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
NPAS2Q99743 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS2Q99743 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms