Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.66■□□□□ 0.74
CDCA3Q99618 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDCA3Q99618 MIR564-202ENST00000385049 94 ntBASIC19.66■□□□□ 0.74
CDCA3Q99618 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CDCA3Q99618 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.66■□□□□ 0.74
CDCA3Q99618 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.66■□□□□ 0.74
CDCA3Q99618 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.66■□□□□ 0.74
CDCA3Q99618 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
CDCA3Q99618 AC120114.3-201ENST00000611923 658 ntBASIC19.66■□□□□ 0.74
CDCA3Q99618 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.66■□□□□ 0.74
CDCA3Q99618 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.66■□□□□ 0.74
CDCA3Q99618 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDCA3Q99618 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDCA3Q99618 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDCA3Q99618 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.65■□□□□ 0.74
CDCA3Q99618 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 IGHGP-201ENST00000390555 1178 ntBASIC19.65■□□□□ 0.74
CDCA3Q99618 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.65■□□□□ 0.74
CDCA3Q99618 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.65■□□□□ 0.74
CDCA3Q99618 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.65■□□□□ 0.74
CDCA3Q99618 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.65■□□□□ 0.74
CDCA3Q99618 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 AL592071.1-201ENST00000611956 408 ntBASIC19.65■□□□□ 0.74
CDCA3Q99618 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.65■□□□□ 0.74
CDCA3Q99618 REXO1L6P-202ENST00000619970 1078 ntBASIC19.65■□□□□ 0.74
CDCA3Q99618 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.65■□□□□ 0.74
CDCA3Q99618 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.65■□□□□ 0.74
CDCA3Q99618 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDCA3Q99618 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.65■□□□□ 0.74
CDCA3Q99618 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA3Q99618 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.64■□□□□ 0.74
CDCA3Q99618 AC008556.1-201ENST00000610908 2040 ntBASIC19.64■□□□□ 0.74
CDCA3Q99618 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.64■□□□□ 0.74
CDCA3Q99618 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDCA3Q99618 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDCA3Q99618 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.64■□□□□ 0.74
CDCA3Q99618 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CDCA3Q99618 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.64■□□□□ 0.73
CDCA3Q99618 AL590627.1-203ENST00000421194 1026 ntBASIC19.64■□□□□ 0.73
CDCA3Q99618 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.64■□□□□ 0.73
CDCA3Q99618 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.64■□□□□ 0.73
CDCA3Q99618 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.64■□□□□ 0.73
CDCA3Q99618 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CDCA3Q99618 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDCA3Q99618 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CDCA3Q99618 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.63■□□□□ 0.73
CDCA3Q99618 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.63■□□□□ 0.73
CDCA3Q99618 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.63■□□□□ 0.73
CDCA3Q99618 AKR1C7P-201ENST00000305623 895 ntBASIC19.63■□□□□ 0.73
CDCA3Q99618 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 PMS2P1-201ENST00000431037 1228 ntBASIC19.63■□□□□ 0.73
CDCA3Q99618 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.63■□□□□ 0.73
CDCA3Q99618 RN7SL606P-201ENST00000472779 293 ntBASIC19.63■□□□□ 0.73
CDCA3Q99618 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.63■□□□□ 0.73
CDCA3Q99618 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.63■□□□□ 0.73
CDCA3Q99618 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.63■□□□□ 0.73
CDCA3Q99618 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CDCA3Q99618 AC124864.1-201ENST00000623408 392 ntBASIC19.63■□□□□ 0.73
CDCA3Q99618 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.63■□□□□ 0.73
CDCA3Q99618 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA3Q99618 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms