Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
MUC4Q99102 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.8□□□□□ -0.2
MUC4Q99102 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MUC4Q99102 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 BICD1-207ENST00000551848 1962 ntBASIC13.79□□□□□ -0.2
MUC4Q99102 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.79□□□□□ -0.2
MUC4Q99102 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.79□□□□□ -0.2
MUC4Q99102 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.79□□□□□ -0.2
MUC4Q99102 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
MUC4Q99102 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.79□□□□□ -0.2
MUC4Q99102 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.79□□□□□ -0.2
MUC4Q99102 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.79□□□□□ -0.2
MUC4Q99102 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
MUC4Q99102 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
MUC4Q99102 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.79□□□□□ -0.2
MUC4Q99102 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
MUC4Q99102 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.79□□□□□ -0.2
MUC4Q99102 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC13.79□□□□□ -0.2
MUC4Q99102 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.79□□□□□ -0.2
MUC4Q99102 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 C1QL1P1-201ENST00000568105 661 ntBASIC13.79□□□□□ -0.2
MUC4Q99102 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.79□□□□□ -0.2
MUC4Q99102 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.79□□□□□ -0.2
MUC4Q99102 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.79□□□□□ -0.2
MUC4Q99102 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MUC4Q99102 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.78□□□□□ -0.2
MUC4Q99102 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
MUC4Q99102 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 AC012618.2-201ENST00000428058 849 ntBASIC13.78□□□□□ -0.2
MUC4Q99102 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.78□□□□□ -0.2
MUC4Q99102 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
MUC4Q99102 AC124016.1-201ENST00000609552 612 ntBASIC13.78□□□□□ -0.2
MUC4Q99102 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.78□□□□□ -0.2
MUC4Q99102 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
MUC4Q99102 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.78□□□□□ -0.2
MUC4Q99102 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.78□□□□□ -0.2
MUC4Q99102 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.78□□□□□ -0.2
MUC4Q99102 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.78□□□□□ -0.2
MUC4Q99102 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.78□□□□□ -0.2
MUC4Q99102 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
MUC4Q99102 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC13.78□□□□□ -0.2
MUC4Q99102 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
MUC4Q99102 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MUC4Q99102 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.78□□□□□ -0.2
MUC4Q99102 TSPY23P-201ENST00000440136 739 ntBASIC13.78□□□□□ -0.2
MUC4Q99102 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.78□□□□□ -0.2
MUC4Q99102 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.78□□□□□ -0.2
MUC4Q99102 RN7SL850P-201ENST00000579959 291 ntBASIC13.78□□□□□ -0.2
MUC4Q99102 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MUC4Q99102 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MUC4Q99102 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
MUC4Q99102 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MUC4Q99102 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
MUC4Q99102 AC138932.1-201ENST00000534164 6830 ntBASIC13.77□□□□□ -0.2
MUC4Q99102 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms