Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MIR718-201ENST00000390190 70 ntBASIC17.86■□□□□ 0.45
COL21A1Q96P44 RPS2P55-201ENST00000397318 883 ntBASIC17.86■□□□□ 0.45
COL21A1Q96P44 NIFKP9-201ENST00000419265 221 ntBASIC17.86■□□□□ 0.45
COL21A1Q96P44 AC012618.2-201ENST00000428058 849 ntBASIC17.86■□□□□ 0.45
COL21A1Q96P44 AC107956.1-201ENST00000494359 873 ntBASIC17.86■□□□□ 0.45
COL21A1Q96P44 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.86■□□□□ 0.45
COL21A1Q96P44 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.86■□□□□ 0.45
COL21A1Q96P44 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.86■□□□□ 0.45
COL21A1Q96P44 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COL21A1Q96P44 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL21A1Q96P44 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL21A1Q96P44 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COL21A1Q96P44 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL21A1Q96P44 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL21A1Q96P44 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.86■□□□□ 0.45
COL21A1Q96P44 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL21A1Q96P44 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL21A1Q96P44 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 KSR1P1-201ENST00000446298 240 ntBASIC17.85■□□□□ 0.45
COL21A1Q96P44 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 AC073195.1-201ENST00000607241 877 ntBASIC17.85■□□□□ 0.45
COL21A1Q96P44 HLA-A-209ENST00000638375 975 ntBASIC17.85■□□□□ 0.45
COL21A1Q96P44 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.85■□□□□ 0.45
COL21A1Q96P44 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL21A1Q96P44 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 IRX1P1-201ENST00000438849 1838 ntBASIC17.84■□□□□ 0.45
COL21A1Q96P44 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 AC233702.5-201ENST00000584107 538 ntBASIC17.84■□□□□ 0.45
COL21A1Q96P44 Z99916.2-201ENST00000604037 246 ntBASIC17.84■□□□□ 0.45
COL21A1Q96P44 AL445675.2-201ENST00000620291 557 ntBASIC17.84■□□□□ 0.45
COL21A1Q96P44 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL21A1Q96P44 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COL21A1Q96P44 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL21A1Q96P44 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.83■□□□□ 0.45
COL21A1Q96P44 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.83■□□□□ 0.45
COL21A1Q96P44 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL21A1Q96P44 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL21A1Q96P44 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL21A1Q96P44 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.83■□□□□ 0.45
COL21A1Q96P44 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL21A1Q96P44 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL21A1Q96P44 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL21A1Q96P44 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms