Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 AK4P3-201ENST00000418260 669 ntBASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RPGRIP1Q96KN7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 TPM4P1-201ENST00000436100 807 ntBASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RPGRIP1Q96KN7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPGRIP1Q96KN7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 KRT18P56-201ENST00000507275 550 ntBASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 AL049812.1-201ENST00000432563 2267 ntBASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPGRIP1Q96KN7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 AC022616.7-201ENST00000525383 220 ntBASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 LINC01238-205ENST00000567549 1107 ntBASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 AL031985.4-201ENST00000642138 673 ntBASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms