Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC97Q96F63 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 KRT8P8-201ENST00000434750 1448 ntBASIC19.26■□□□□ 0.67
CCDC97Q96F63 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC97Q96F63 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC97Q96F63 AL355075.4-201ENST00000554988 638 ntBASIC19.26■□□□□ 0.67
CCDC97Q96F63 C1QL1P1-201ENST00000568105 661 ntBASIC19.26■□□□□ 0.67
CCDC97Q96F63 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC97Q96F63 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC97Q96F63 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC97Q96F63 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CCDC97Q96F63 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC97Q96F63 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC97Q96F63 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC97Q96F63 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC97Q96F63 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 RCN1P1-201ENST00000400413 996 ntBASIC19.25■□□□□ 0.67
CCDC97Q96F63 KRT16P5-201ENST00000455284 522 ntBASIC19.25■□□□□ 0.67
CCDC97Q96F63 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC97Q96F63 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC97Q96F63 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC97Q96F63 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC97Q96F63 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC97Q96F63 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC97Q96F63 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC97Q96F63 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 TMPOP1-202ENST00000424642 1267 ntBASIC19.24■□□□□ 0.67
CCDC97Q96F63 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 HLA-A-209ENST00000638375 975 ntBASIC19.24■□□□□ 0.67
CCDC97Q96F63 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC97Q96F63 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC97Q96F63 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC97Q96F63 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC97Q96F63 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC97Q96F63 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC97Q96F63 SDHAP1-207ENST00000440850 2000 ntBASIC19.24■□□□□ 0.67
CCDC97Q96F63 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC97Q96F63 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC97Q96F63 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC97Q96F63 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 AL355355.2-201ENST00000442321 338 ntBASIC19.23■□□□□ 0.67
CCDC97Q96F63 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms