Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM12Q96EX1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMIM12Q96EX1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMIM12Q96EX1 AC004854.2-201ENST00000608450 1441 ntBASIC14.4□□□□□ -0.1
SMIM12Q96EX1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SMIM12Q96EX1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 ESPNP-201ENST00000270691 2015 ntBASIC14.38□□□□□ -0.11
SMIM12Q96EX1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 C2orf69P4-201ENST00000565394 541 ntBASIC14.38□□□□□ -0.11
SMIM12Q96EX1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM12Q96EX1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms