Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTP4Q96DX8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.28■□□□□ 0.68
RTP4Q96DX8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTP4Q96DX8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTP4Q96DX8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTP4Q96DX8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.28■□□□□ 0.68
RTP4Q96DX8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTP4Q96DX8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTP4Q96DX8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTP4Q96DX8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTP4Q96DX8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTP4Q96DX8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTP4Q96DX8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTP4Q96DX8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTP4Q96DX8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTP4Q96DX8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTP4Q96DX8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTP4Q96DX8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 CKBP1-201ENST00000565489 1086 ntBASIC19.27■□□□□ 0.68
RTP4Q96DX8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RTP4Q96DX8 AC073195.1-201ENST00000607241 877 ntBASIC19.27■□□□□ 0.68
RTP4Q96DX8 AC130371.2-201ENST00000619443 611 ntBASIC19.27■□□□□ 0.68
RTP4Q96DX8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTP4Q96DX8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.27■□□□□ 0.67
RTP4Q96DX8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
RTP4Q96DX8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RTP4Q96DX8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTP4Q96DX8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.26■□□□□ 0.67
RTP4Q96DX8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.26■□□□□ 0.67
RTP4Q96DX8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 AC012618.2-201ENST00000428058 849 ntBASIC19.26■□□□□ 0.67
RTP4Q96DX8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.26■□□□□ 0.67
RTP4Q96DX8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.26■□□□□ 0.67
RTP4Q96DX8 AC011298.2-201ENST00000617989 482 ntBASIC19.26■□□□□ 0.67
RTP4Q96DX8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.26■□□□□ 0.67
RTP4Q96DX8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.26■□□□□ 0.67
RTP4Q96DX8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
RTP4Q96DX8 AL354751.1-201ENST00000412768 1863 ntBASIC19.26■□□□□ 0.67
RTP4Q96DX8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RTP4Q96DX8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTP4Q96DX8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RTP4Q96DX8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.25■□□□□ 0.67
RTP4Q96DX8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.25■□□□□ 0.67
RTP4Q96DX8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.25■□□□□ 0.67
RTP4Q96DX8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 AC120498.9-201ENST00000339021 3867 ntBASIC19.25■□□□□ 0.67
RTP4Q96DX8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RTP4Q96DX8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 RPS2P55-201ENST00000397318 883 ntBASIC19.25■□□□□ 0.67
RTP4Q96DX8 AC107956.1-201ENST00000494359 873 ntBASIC19.25■□□□□ 0.67
RTP4Q96DX8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.25■□□□□ 0.67
RTP4Q96DX8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.25■□□□□ 0.67
RTP4Q96DX8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.25■□□□□ 0.67
RTP4Q96DX8 AC233702.5-201ENST00000584107 538 ntBASIC19.25■□□□□ 0.67
RTP4Q96DX8 CR392000.1-201ENST00000624770 1228 ntBASIC19.25■□□□□ 0.67
RTP4Q96DX8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.25■□□□□ 0.67
RTP4Q96DX8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.25■□□□□ 0.67
RTP4Q96DX8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTP4Q96DX8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms