Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC1Q92922 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC24.16■■□□□ 1.46
SMARCC1Q92922 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
SMARCC1Q92922 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC1Q92922 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
SMARCC1Q92922 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SMARCC1Q92922 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SMARCC1Q92922 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC1Q92922 PKD1P6-201ENST00000343738 4769 ntBASIC24.15■■□□□ 1.46
SMARCC1Q92922 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
SMARCC1Q92922 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC24.15■■□□□ 1.46
SMARCC1Q92922 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC1Q92922 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC1Q92922 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC1Q92922 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC1Q92922 AC079776.4-201ENST00000511039 504 ntBASIC24.15■■□□□ 1.46
SMARCC1Q92922 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC24.15■■□□□ 1.46
SMARCC1Q92922 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC1Q92922 VPS51-217ENST00000639871 243 ntTSL 5 BASIC24.15■■□□□ 1.46
SMARCC1Q92922 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.15■■□□□ 1.46
SMARCC1Q92922 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC1Q92922 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SMARCC1Q92922 RCC2P3-201ENST00000418112 1537 ntBASIC24.15■■□□□ 1.46
SMARCC1Q92922 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SMARCC1Q92922 AC099778.1-201ENST00000568593 1911 ntBASIC24.14■■□□□ 1.46
SMARCC1Q92922 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SMARCC1Q92922 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC1Q92922 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC1Q92922 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC1Q92922 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC24.14■■□□□ 1.45
SMARCC1Q92922 MRPL3P1-201ENST00000400109 1033 ntBASIC24.14■■□□□ 1.45
SMARCC1Q92922 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC24.14■■□□□ 1.45
SMARCC1Q92922 LINC00167-201ENST00000530583 1419 ntBASIC24.14■■□□□ 1.45
SMARCC1Q92922 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC24.14■■□□□ 1.45
SMARCC1Q92922 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC24.14■■□□□ 1.45
SMARCC1Q92922 AC099336.1-202ENST00000602961 463 ntBASIC24.14■■□□□ 1.45
SMARCC1Q92922 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SMARCC1Q92922 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC24.14■■□□□ 1.45
SMARCC1Q92922 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC1Q92922 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC1Q92922 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC1Q92922 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SMARCC1Q92922 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC1Q92922 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC24.13■■□□□ 1.45
SMARCC1Q92922 GPR32P1-201ENST00000601788 811 ntBASIC24.13■■□□□ 1.45
SMARCC1Q92922 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC1Q92922 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.13■■□□□ 1.45
SMARCC1Q92922 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SMARCC1Q92922 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SMARCC1Q92922 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC24.13■■□□□ 1.45
SMARCC1Q92922 AL512353.2-201ENST00000448759 1962 ntBASIC24.12■■□□□ 1.45
SMARCC1Q92922 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 AC008556.1-201ENST00000610908 2040 ntBASIC24.12■■□□□ 1.45
SMARCC1Q92922 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 ENSA-205ENST00000361532 792 ntTSL 2 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 IGHV3-47-201ENST00000425060 335 ntBASIC24.12■■□□□ 1.45
SMARCC1Q92922 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 PENK-208ENST00000523051 772 ntTSL 5 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 MIR3180-4-201ENST00000582223 153 ntBASIC24.12■■□□□ 1.45
SMARCC1Q92922 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC1Q92922 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC24.12■■□□□ 1.45
SMARCC1Q92922 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
SMARCC1Q92922 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC24.11■■□□□ 1.45
SMARCC1Q92922 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
SMARCC1Q92922 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 BX640515.1-201ENST00000617215 977 ntBASIC24.11■■□□□ 1.45
SMARCC1Q92922 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.11■■□□□ 1.45
SMARCC1Q92922 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC1Q92922 HLA-A-201ENST00000376802 1334 ntBASIC24.1■■□□□ 1.45
SMARCC1Q92922 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
SMARCC1Q92922 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.1■■□□□ 1.45
SMARCC1Q92922 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
SMARCC1Q92922 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms