Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM9SF4Q92544 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.82■□□□□ 0.44
TM9SF4Q92544 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.82■□□□□ 0.44
TM9SF4Q92544 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.82■□□□□ 0.44
TM9SF4Q92544 AC092647.4-201ENST00000457211 535 ntBASIC17.82■□□□□ 0.44
TM9SF4Q92544 AC063952.2-201ENST00000498792 1227 ntBASIC17.82■□□□□ 0.44
TM9SF4Q92544 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TM9SF4Q92544 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.82■□□□□ 0.44
TM9SF4Q92544 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.82■□□□□ 0.44
TM9SF4Q92544 AL031432.5-201ENST00000641059 760 ntBASIC17.82■□□□□ 0.44
TM9SF4Q92544 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TM9SF4Q92544 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.82■□□□□ 0.44
TM9SF4Q92544 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TM9SF4Q92544 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TM9SF4Q92544 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM9SF4Q92544 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF4Q92544 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF4Q92544 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF4Q92544 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF4Q92544 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 RNF152P1-201ENST00000397754 604 ntBASIC17.81■□□□□ 0.44
TM9SF4Q92544 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF4Q92544 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF4Q92544 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM9SF4Q92544 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.81■□□□□ 0.44
TM9SF4Q92544 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.8■□□□□ 0.44
TM9SF4Q92544 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF4Q92544 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF4Q92544 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF4Q92544 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF4Q92544 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.8■□□□□ 0.44
TM9SF4Q92544 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 AC091390.4-202ENST00000476426 537 ntBASIC17.8■□□□□ 0.44
TM9SF4Q92544 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 COX11P1-201ENST00000489116 835 ntBASIC17.8■□□□□ 0.44
TM9SF4Q92544 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 AL160286.2-201ENST00000567150 934 ntBASIC17.8■□□□□ 0.44
TM9SF4Q92544 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF4Q92544 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF4Q92544 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF4Q92544 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM9SF4Q92544 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.8■□□□□ 0.44
TM9SF4Q92544 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms