Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL353801.3-201ENST00000609898 542 ntBASIC22.99■■□□□ 1.27
SNED1Q8TER0 TP73-AS1-207ENST00000624167 988 ntBASIC22.99■■□□□ 1.27
SNED1Q8TER0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.99■■□□□ 1.27
SNED1Q8TER0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
SNED1Q8TER0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.99■■□□□ 1.27
SNED1Q8TER0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 AL109659.2-201ENST00000606809 1674 ntBASIC22.99■■□□□ 1.27
SNED1Q8TER0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.99■■□□□ 1.27
SNED1Q8TER0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.99■■□□□ 1.27
SNED1Q8TER0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNED1Q8TER0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SNED1Q8TER0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.98■■□□□ 1.27
SNED1Q8TER0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SNED1Q8TER0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.98■■□□□ 1.27
SNED1Q8TER0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.98■■□□□ 1.27
SNED1Q8TER0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 AC104819.1-201ENST00000504587 486 ntBASIC22.98■■□□□ 1.27
SNED1Q8TER0 AC074051.2-201ENST00000565115 352 ntBASIC22.98■■□□□ 1.27
SNED1Q8TER0 AP005901.3-202ENST00000581653 237 ntBASIC22.98■■□□□ 1.27
SNED1Q8TER0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.98■■□□□ 1.27
SNED1Q8TER0 LINC00167-201ENST00000530583 1419 ntBASIC22.98■■□□□ 1.27
SNED1Q8TER0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SNED1Q8TER0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
SNED1Q8TER0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SNED1Q8TER0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SNED1Q8TER0 AP000593.1-201ENST00000393668 712 ntBASIC22.97■■□□□ 1.27
SNED1Q8TER0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.97■■□□□ 1.27
SNED1Q8TER0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC22.97■■□□□ 1.27
SNED1Q8TER0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.97■■□□□ 1.27
SNED1Q8TER0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SNED1Q8TER0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SNED1Q8TER0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNED1Q8TER0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SNED1Q8TER0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNED1Q8TER0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNED1Q8TER0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNED1Q8TER0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNED1Q8TER0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SNED1Q8TER0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNED1Q8TER0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNED1Q8TER0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 AC005332.3-201ENST00000589904 676 ntBASIC22.96■■□□□ 1.27
SNED1Q8TER0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 BX640515.1-201ENST00000617215 977 ntBASIC22.96■■□□□ 1.27
SNED1Q8TER0 REXO1L6P-202ENST00000619970 1078 ntBASIC22.96■■□□□ 1.27
SNED1Q8TER0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 LINC01521-201ENST00000504184 1943 ntBASIC22.96■■□□□ 1.27
SNED1Q8TER0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.96■■□□□ 1.27
SNED1Q8TER0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNED1Q8TER0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
SNED1Q8TER0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.95■■□□□ 1.27
SNED1Q8TER0 AC112907.3-201ENST00000577781 2400 ntBASIC22.95■■□□□ 1.26
SNED1Q8TER0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.95■■□□□ 1.26
SNED1Q8TER0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SNED1Q8TER0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SNED1Q8TER0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SNED1Q8TER0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms