Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHD6Q8TD26 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CHD6Q8TD26 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD6Q8TD26 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.01■□□□□ 0.31
CHD6Q8TD26 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD6Q8TD26 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.01■□□□□ 0.31
CHD6Q8TD26 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD6Q8TD26 GPR32P1-201ENST00000601788 811 ntBASIC17.01■□□□□ 0.31
CHD6Q8TD26 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.01■□□□□ 0.31
CHD6Q8TD26 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD6Q8TD26 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD6Q8TD26 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.01■□□□□ 0.31
CHD6Q8TD26 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD6Q8TD26 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD6Q8TD26 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.01■□□□□ 0.31
CHD6Q8TD26 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHD6Q8TD26 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD6Q8TD26 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17■□□□□ 0.31
CHD6Q8TD26 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17■□□□□ 0.31
CHD6Q8TD26 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CHD6Q8TD26 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17■□□□□ 0.31
CHD6Q8TD26 PDPK2P-202ENST00000562415 1191 ntBASIC17■□□□□ 0.31
CHD6Q8TD26 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17■□□□□ 0.31
CHD6Q8TD26 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CHD6Q8TD26 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHD6Q8TD26 PHGDH-210ENST00000641115 1638 ntBASIC17■□□□□ 0.31
CHD6Q8TD26 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17■□□□□ 0.31
CHD6Q8TD26 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHD6Q8TD26 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CHD6Q8TD26 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.99■□□□□ 0.31
CHD6Q8TD26 TERF1P3-201ENST00000505638 1227 ntBASIC16.99■□□□□ 0.31
CHD6Q8TD26 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.99■□□□□ 0.31
CHD6Q8TD26 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.99■□□□□ 0.31
CHD6Q8TD26 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD6Q8TD26 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.99■□□□□ 0.31
CHD6Q8TD26 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHD6Q8TD26 AC092910.1-201ENST00000482027 1129 ntBASIC16.99■□□□□ 0.31
CHD6Q8TD26 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHD6Q8TD26 AC105339.3-201ENST00000560043 636 ntBASIC16.99■□□□□ 0.31
CHD6Q8TD26 AL132655.2-201ENST00000596276 594 ntBASIC16.99■□□□□ 0.31
CHD6Q8TD26 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD6Q8TD26 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHD6Q8TD26 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHD6Q8TD26 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHD6Q8TD26 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD6Q8TD26 AC005229.4-201ENST00000610085 2198 ntBASIC16.99■□□□□ 0.31
CHD6Q8TD26 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD6Q8TD26 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHD6Q8TD26 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD6Q8TD26 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD6Q8TD26 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD6Q8TD26 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD6Q8TD26 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD6Q8TD26 AC236430.1-201ENST00000402231 743 ntBASIC16.98■□□□□ 0.31
CHD6Q8TD26 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHD6Q8TD26 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHD6Q8TD26 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD6Q8TD26 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD6Q8TD26 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 ATP5G2P4-201ENST00000442175 420 ntBASIC16.98■□□□□ 0.31
CHD6Q8TD26 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD6Q8TD26 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms