Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 HMGA1P5-201ENST00000412453 271 ntBASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 SLC25A1P2-201ENST00000430693 912 ntBASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDND2Q8NHS1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 AIRN-201ENST00000601203 4374 ntBASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 AC093484.2-201ENST00000580996 2166 ntBASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDND2Q8NHS1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 AC006011.2-201ENST00000621313 1158 ntBASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 KRT8P41-201ENST00000533985 1514 ntBASIC16.04■□□□□ 0.16
CLDND2Q8NHS1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms