Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 NAPSB-206ENST00000562112 1266 ntBASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC148Q8NFR7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 CCR12P-201ENST00000446203 998 ntBASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCDC148Q8NFR7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 KRT8P9-201ENST00000558927 1449 ntBASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC148Q8NFR7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 TSPY14P-201ENST00000303979 915 ntBASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 TSPY17P-201ENST00000450329 467 ntBASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 EGLN1P1-201ENST00000531623 762 ntBASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 AC073912.3-201ENST00000624414 853 ntBASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 AC116562.4-202ENST00000641738 218 ntBASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC148Q8NFR7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 CYP2D8P-201ENST00000433633 1490 ntBASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 AC087499.1-201ENST00000418141 1075 ntBASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 AL023803.3-201ENST00000615559 522 ntBASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC148Q8NFR7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms