Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00311Q8N616 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00311Q8N616 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00311Q8N616 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LINC00311Q8N616 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC00311Q8N616 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00311Q8N616 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
LINC00311Q8N616 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00311Q8N616 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00311Q8N616 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC00311Q8N616 MTMR9LP-203ENST00000426597 1545 ntBASIC15.33■□□□□ 0.04
LINC00311Q8N616 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.32■□□□□ 0.04
LINC00311Q8N616 ANO7L1-203ENST00000602586 1720 ntBASIC15.32■□□□□ 0.04
LINC00311Q8N616 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 SNORA78-201ENST00000459373 127 ntBASIC15.32■□□□□ 0.04
LINC00311Q8N616 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 FITM1-202ENST00000559294 800 ntBASIC15.32■□□□□ 0.04
LINC00311Q8N616 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LINC00311Q8N616 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00311Q8N616 AL109659.2-201ENST00000606809 1674 ntBASIC15.32■□□□□ 0.04
LINC00311Q8N616 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 RCC2P3-201ENST00000418112 1537 ntBASIC15.31■□□□□ 0.04
LINC00311Q8N616 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00311Q8N616 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LINC00311Q8N616 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 AC120498.9-201ENST00000339021 3867 ntBASIC15.3■□□□□ 0.04
LINC00311Q8N616 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00311Q8N616 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LINC00311Q8N616 SLC25A1P2-201ENST00000430693 912 ntBASIC15.3■□□□□ 0.04
LINC00311Q8N616 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC00311Q8N616 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LINC00311Q8N616 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00311Q8N616 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC00311Q8N616 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00311Q8N616 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC00311Q8N616 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LINC00311Q8N616 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC00311Q8N616 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00311Q8N616 AC008622.2-201ENST00000617006 1229 ntBASIC15.3■□□□□ 0.04
LINC00311Q8N616 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms