Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39CQ8N584 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39CQ8N584 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39CQ8N584 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.08■□□□□ 0.81
TTC39CQ8N584 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
TTC39CQ8N584 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39CQ8N584 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC39CQ8N584 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TTC39CQ8N584 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39CQ8N584 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39CQ8N584 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.08■□□□□ 0.81
TTC39CQ8N584 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC39CQ8N584 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39CQ8N584 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39CQ8N584 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC39CQ8N584 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC39CQ8N584 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC39CQ8N584 AP003041.3-201ENST00000527151 707 ntBASIC20.08■□□□□ 0.81
TTC39CQ8N584 AC008622.2-201ENST00000617006 1229 ntBASIC20.08■□□□□ 0.81
TTC39CQ8N584 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39CQ8N584 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39CQ8N584 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
TTC39CQ8N584 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39CQ8N584 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TTC39CQ8N584 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
TTC39CQ8N584 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39CQ8N584 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39CQ8N584 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
TTC39CQ8N584 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39CQ8N584 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC39CQ8N584 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39CQ8N584 RCC2P3-201ENST00000418112 1537 ntBASIC20.07■□□□□ 0.8
TTC39CQ8N584 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39CQ8N584 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39CQ8N584 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39CQ8N584 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39CQ8N584 AL023284.2-201ENST00000405850 579 ntBASIC20.07■□□□□ 0.8
TTC39CQ8N584 HMGA1P5-201ENST00000412453 271 ntBASIC20.07■□□□□ 0.8
TTC39CQ8N584 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.07■□□□□ 0.8
TTC39CQ8N584 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.07■□□□□ 0.8
TTC39CQ8N584 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC39CQ8N584 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.07■□□□□ 0.8
TTC39CQ8N584 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC39CQ8N584 AC097493.4-201ENST00000641197 219 ntBASIC20.07■□□□□ 0.8
TTC39CQ8N584 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39CQ8N584 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TTC39CQ8N584 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39CQ8N584 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC39CQ8N584 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TTC39CQ8N584 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39CQ8N584 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39CQ8N584 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.07■□□□□ 0.8
TTC39CQ8N584 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.06■□□□□ 0.8
TTC39CQ8N584 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.06■□□□□ 0.8
TTC39CQ8N584 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.06■□□□□ 0.8
TTC39CQ8N584 AC006333.2-201ENST00000607957 2099 ntBASIC20.06■□□□□ 0.8
TTC39CQ8N584 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TTC39CQ8N584 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.06■□□□□ 0.8
TTC39CQ8N584 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.06■□□□□ 0.8
TTC39CQ8N584 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TTC39CQ8N584 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39CQ8N584 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.05■□□□□ 0.8
TTC39CQ8N584 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.05■□□□□ 0.8
TTC39CQ8N584 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.05■□□□□ 0.8
TTC39CQ8N584 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TTC39CQ8N584 AC012306.2-201ENST00000609350 630 ntBASIC20.05■□□□□ 0.8
TTC39CQ8N584 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.05■□□□□ 0.8
TTC39CQ8N584 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TTC39CQ8N584 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TTC39CQ8N584 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.05■□□□□ 0.8
TTC39CQ8N584 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 GPAT2P1-201ENST00000444924 1672 ntBASIC20.05■□□□□ 0.8
TTC39CQ8N584 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TTC39CQ8N584 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.05■□□□□ 0.8
TTC39CQ8N584 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39CQ8N584 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms