Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
AFAP1Q8N556 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
AFAP1Q8N556 KRT8P7-201ENST00000533003 1432 ntBASIC28.28■■■□□ 2.12
AFAP1Q8N556 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC28.28■■■□□ 2.12
AFAP1Q8N556 IGHGP-201ENST00000390555 1178 ntBASIC28.28■■■□□ 2.12
AFAP1Q8N556 KRT18P13-201ENST00000400056 1290 ntBASIC28.28■■■□□ 2.12
AFAP1Q8N556 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC28.28■■■□□ 2.12
AFAP1Q8N556 MOK-208ENST00000519058 917 ntTSL 2 BASIC28.28■■■□□ 2.12
AFAP1Q8N556 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
AFAP1Q8N556 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
AFAP1Q8N556 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
AFAP1Q8N556 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
AFAP1Q8N556 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
AFAP1Q8N556 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
AFAP1Q8N556 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
AFAP1Q8N556 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
AFAP1Q8N556 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC28.27■■■□□ 2.12
AFAP1Q8N556 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
AFAP1Q8N556 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
AFAP1Q8N556 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
AFAP1Q8N556 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC28.27■■■□□ 2.12
AFAP1Q8N556 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC28.27■■■□□ 2.12
AFAP1Q8N556 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
AFAP1Q8N556 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
AFAP1Q8N556 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
AFAP1Q8N556 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC28.27■■■□□ 2.12
AFAP1Q8N556 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
AFAP1Q8N556 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC28.27■■■□□ 2.12
AFAP1Q8N556 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
AFAP1Q8N556 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
AFAP1Q8N556 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC28.27■■■□□ 2.12
AFAP1Q8N556 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
AFAP1Q8N556 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC28.26■■■□□ 2.11
AFAP1Q8N556 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
AFAP1Q8N556 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
AFAP1Q8N556 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
AFAP1Q8N556 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
AFAP1Q8N556 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC28.26■■■□□ 2.11
AFAP1Q8N556 AP001005.1-201ENST00000571755 1248 ntBASIC28.26■■■□□ 2.11
AFAP1Q8N556 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC28.26■■■□□ 2.11
AFAP1Q8N556 AC124864.1-201ENST00000623408 392 ntBASIC28.26■■■□□ 2.11
AFAP1Q8N556 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.11
AFAP1Q8N556 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
AFAP1Q8N556 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
AFAP1Q8N556 AL512353.2-201ENST00000448759 1962 ntBASIC28.26■■■□□ 2.11
AFAP1Q8N556 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
AFAP1Q8N556 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC28.25■■■□□ 2.11
AFAP1Q8N556 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
AFAP1Q8N556 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
AFAP1Q8N556 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
AFAP1Q8N556 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
AFAP1Q8N556 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
AFAP1Q8N556 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
AFAP1Q8N556 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
AFAP1Q8N556 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
AFAP1Q8N556 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
AFAP1Q8N556 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC28.25■■■□□ 2.11
AFAP1Q8N556 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC28.25■■■□□ 2.11
AFAP1Q8N556 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
AFAP1Q8N556 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC28.25■■■□□ 2.11
AFAP1Q8N556 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
AFAP1Q8N556 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC28.25■■■□□ 2.11
AFAP1Q8N556 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC28.25■■■□□ 2.11
AFAP1Q8N556 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC28.25■■■□□ 2.11
AFAP1Q8N556 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 PBK-203ENST00000522944 1499 ntTSL 2 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
AFAP1Q8N556 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
AFAP1Q8N556 CDV3-207ENST00000508481 661 ntTSL 3 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 AC148477.8-201ENST00000624298 468 ntBASIC28.24■■■□□ 2.11
AFAP1Q8N556 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
AFAP1Q8N556 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC28.24■■■□□ 2.11
AFAP1Q8N556 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC28.23■■■□□ 2.11
AFAP1Q8N556 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
AFAP1Q8N556 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
AFAP1Q8N556 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
AFAP1Q8N556 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
AFAP1Q8N556 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
AFAP1Q8N556 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
AFAP1Q8N556 NUS1P2-201ENST00000417358 873 ntBASIC28.23■■■□□ 2.11
AFAP1Q8N556 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC28.23■■■□□ 2.11
AFAP1Q8N556 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
AFAP1Q8N556 TEN1-204ENST00000588202 862 ntTSL 3 BASIC28.23■■■□□ 2.11
AFAP1Q8N556 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
AFAP1Q8N556 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC28.23■■■□□ 2.11
AFAP1Q8N556 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC28.23■■■□□ 2.11
AFAP1Q8N556 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC28.23■■■□□ 2.11
AFAP1Q8N556 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC28.23■■■□□ 2.11
AFAP1Q8N556 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
AFAP1Q8N556 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
AFAP1Q8N556 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
AFAP1Q8N556 MED17-221ENST00000639724 2317 ntTSL 5 BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms