Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 LIN28AP1-201ENST00000429574 405 ntBASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 MCCD1P1-208ENST00000445732 328 ntBASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 AC117947.1-201ENST00000427448 529 ntBASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 MIR3180-5-201ENST00000583743 153 ntBASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 AC008556.1-201ENST00000610908 2040 ntBASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.82■□□□□ 0.44
ARHGEF39Q8N4T4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 NEK4P2-201ENST00000580004 1012 ntBASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 AC036111.1-201ENST00000533973 1582 ntBASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ARHGEF39Q8N4T4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 AC009947.2-201ENST00000444014 672 ntBASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 AC139887.4-201ENST00000607877 719 ntBASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 AC083906.6-201ENST00000641366 219 ntBASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.8■□□□□ 0.44
ARHGEF39Q8N4T4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms