Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD3Q8N328 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD3Q8N328 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PGBD3Q8N328 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD3Q8N328 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD3Q8N328 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD3Q8N328 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD3Q8N328 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PGBD3Q8N328 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD3Q8N328 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PGBD3Q8N328 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD3Q8N328 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.17■□□□□ 0.66
PGBD3Q8N328 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.17■□□□□ 0.66
PGBD3Q8N328 AL136038.3-201ENST00000561909 1096 ntBASIC19.17■□□□□ 0.66
PGBD3Q8N328 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.17■□□□□ 0.66
PGBD3Q8N328 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD3Q8N328 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD3Q8N328 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD3Q8N328 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD3Q8N328 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PGBD3Q8N328 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.17■□□□□ 0.66
PGBD3Q8N328 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD3Q8N328 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD3Q8N328 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD3Q8N328 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD3Q8N328 STARP1-201ENST00000397973 869 ntBASIC19.16■□□□□ 0.66
PGBD3Q8N328 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD3Q8N328 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.16■□□□□ 0.66
PGBD3Q8N328 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD3Q8N328 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD3Q8N328 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD3Q8N328 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD3Q8N328 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PGBD3Q8N328 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.16■□□□□ 0.66
PGBD3Q8N328 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 TPM4P1-201ENST00000436100 807 ntBASIC19.15■□□□□ 0.66
PGBD3Q8N328 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PGBD3Q8N328 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
PGBD3Q8N328 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PGBD3Q8N328 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.14■□□□□ 0.66
PGBD3Q8N328 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.14■□□□□ 0.66
PGBD3Q8N328 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PGBD3Q8N328 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.14■□□□□ 0.66
PGBD3Q8N328 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PGBD3Q8N328 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
PGBD3Q8N328 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PGBD3Q8N328 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PGBD3Q8N328 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PGBD3Q8N328 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.14■□□□□ 0.65
PGBD3Q8N328 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD3Q8N328 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD3Q8N328 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.14■□□□□ 0.65
PGBD3Q8N328 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD3Q8N328 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PGBD3Q8N328 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.14■□□□□ 0.65
PGBD3Q8N328 AC083849.1-201ENST00000615227 514 ntBASIC19.14■□□□□ 0.65
PGBD3Q8N328 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.14■□□□□ 0.65
PGBD3Q8N328 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PGBD3Q8N328 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD3Q8N328 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PGBD3Q8N328 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms