Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 AL512604.3-201ENST00000569583 964 ntBASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 AC010331.1-201ENST00000611423 582 ntBASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 AC120498.9-201ENST00000339021 3867 ntBASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 AL158211.5-201ENST00000623583 2518 ntBASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 AL049597.2-201ENST00000565575 961 ntBASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRIM48Q8IWZ4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.52■□□□□ 0.55
TRIM48Q8IWZ4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.52■□□□□ 0.55
TRIM48Q8IWZ4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.52■□□□□ 0.55
TRIM48Q8IWZ4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM48Q8IWZ4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM48Q8IWZ4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM48Q8IWZ4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.52■□□□□ 0.55
TRIM48Q8IWZ4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 AP003041.3-201ENST00000527151 707 ntBASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRIM48Q8IWZ4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms