Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC28Q86X40 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC28Q86X40 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 BCL2-203ENST00000589955 5011 ntBASIC16.8■□□□□ 0.28
LRRC28Q86X40 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 ABALON-201ENST00000629058 1903 ntBASIC16.8■□□□□ 0.28
LRRC28Q86X40 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC28Q86X40 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC28Q86X40 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms