Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF44Q7L0R7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF44Q7L0R7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF44Q7L0R7 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.12■□□□□ 0.49
RNF44Q7L0R7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF44Q7L0R7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF44Q7L0R7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
RNF44Q7L0R7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 AC113347.1-201ENST00000413321 391 ntBASIC18.11■□□□□ 0.49
RNF44Q7L0R7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 AP003041.3-201ENST00000527151 707 ntBASIC18.11■□□□□ 0.49
RNF44Q7L0R7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 AC120498.9-201ENST00000339021 3867 ntBASIC18.11■□□□□ 0.49
RNF44Q7L0R7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF44Q7L0R7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 HMGA1P5-201ENST00000412453 271 ntBASIC18.1■□□□□ 0.49
RNF44Q7L0R7 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.1■□□□□ 0.49
RNF44Q7L0R7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF44Q7L0R7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RNF44Q7L0R7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF44Q7L0R7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms