Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 AC073912.3-201ENST00000624414 853 ntBASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 AC080080.1-201ENST00000625121 2420 ntBASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXR1Q6PIV2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.64■□□□□ 0.74
FOXR1Q6PIV2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.64■□□□□ 0.74
FOXR1Q6PIV2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
FOXR1Q6PIV2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 POM121L13P-201ENST00000422362 380 ntBASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 AC105020.6-201ENST00000621523 1217 ntBASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 REXO1L12P-201ENST00000622156 912 ntBASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXR1Q6PIV2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms