Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 MIR3180-5-201ENST00000583743 153 ntBASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCDC62Q6P9F0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 MCCD1P1-208ENST00000445732 328 ntBASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 AC092597.1-201ENST00000487352 616 ntBASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 AC024243.1-201ENST00000609234 778 ntBASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 AC093458.2-201ENST00000623150 629 ntBASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC62Q6P9F0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC62Q6P9F0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 SEC1P-202ENST00000473944 940 ntBASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 AC069148.1-201ENST00000608741 768 ntBASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC62Q6P9F0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC62Q6P9F0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC62Q6P9F0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC62Q6P9F0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC62Q6P9F0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CCDC62Q6P9F0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC62Q6P9F0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC62Q6P9F0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms