Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC10.08□□□□□ -0.8
RNF213Q63HN8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RNF213Q63HN8 HLA-DPB2-205ENST00000435074 1188 ntBASIC10.07□□□□□ -0.8
RNF213Q63HN8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RNF213Q63HN8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RNF213Q63HN8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 AL132655.2-201ENST00000596276 594 ntBASIC10.07□□□□□ -0.8
RNF213Q63HN8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RNF213Q63HN8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RNF213Q63HN8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 INGX-202ENST00000489074 768 ntBASIC10.07□□□□□ -0.8
RNF213Q63HN8 TERF1P3-201ENST00000505638 1227 ntBASIC10.07□□□□□ -0.8
RNF213Q63HN8 AC116407.2-201ENST00000613639 860 ntBASIC10.07□□□□□ -0.8
RNF213Q63HN8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
RNF213Q63HN8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RNF213Q63HN8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RNF213Q63HN8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RNF213Q63HN8 HLA-DRB6-201ENST00000411500 1235 ntBASIC10.07□□□□□ -0.8
RNF213Q63HN8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10.07□□□□□ -0.8
RNF213Q63HN8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RNF213Q63HN8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 C1orf229-201ENST00000623686 2258 ntBASIC10.06□□□□□ -0.8
RNF213Q63HN8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 NME2P1-201ENST00000426182 414 ntBASIC10.06□□□□□ -0.8
RNF213Q63HN8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
RNF213Q63HN8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RNF213Q63HN8 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 TSPY16P-201ENST00000449843 468 ntBASIC10.05□□□□□ -0.8
RNF213Q63HN8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC10.05□□□□□ -0.8
RNF213Q63HN8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RNF213Q63HN8 C20orf181-201ENST00000623918 480 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms