Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC38Q5VT99 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 AL135905.2-201ENST00000584934 1404 ntBASIC19.62■□□□□ 0.73
LRRC38Q5VT99 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 FAM201B-201ENST00000458407 597 ntBASIC19.62■□□□□ 0.73
LRRC38Q5VT99 AC011506.1-201ENST00000474329 610 ntBASIC19.62■□□□□ 0.73
LRRC38Q5VT99 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 MIR6786-201ENST00000616843 113 ntBASIC19.62■□□□□ 0.73
LRRC38Q5VT99 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC38Q5VT99 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 FAM207BP-201ENST00000447172 505 ntBASIC19.61■□□□□ 0.73
LRRC38Q5VT99 B3GAT3P1-201ENST00000471720 806 ntBASIC19.61■□□□□ 0.73
LRRC38Q5VT99 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC38Q5VT99 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 FSCN1P1-201ENST00000568912 1481 ntBASIC19.6■□□□□ 0.73
LRRC38Q5VT99 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC38Q5VT99 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 MESTP1-201ENST00000404287 994 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms