Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 RAP2CP1-201ENST00000605103 478 ntBASIC16.88■□□□□ 0.29
CCDC58Q4VC31 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 AC087623.3-201ENST00000607047 1098 ntBASIC16.87■□□□□ 0.29
CCDC58Q4VC31 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 AC083906.6-201ENST00000641366 219 ntBASIC16.87■□□□□ 0.29
CCDC58Q4VC31 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC58Q4VC31 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 AP006587.1-201ENST00000534129 1502 ntBASIC16.86■□□□□ 0.29
CCDC58Q4VC31 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC58Q4VC31 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 AL513477.1-201ENST00000602865 2407 ntBASIC16.85■□□□□ 0.29
CCDC58Q4VC31 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC58Q4VC31 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms