Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA1Q09470 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA1Q09470 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA1Q09470 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.75■□□□□ 0.91
KCNA1Q09470 AL023803.3-201ENST00000615559 522 ntBASIC20.75■□□□□ 0.91
KCNA1Q09470 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNA1Q09470 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNA1Q09470 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
KCNA1Q09470 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
KCNA1Q09470 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNA1Q09470 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNA1Q09470 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.75■□□□□ 0.91
KCNA1Q09470 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNA1Q09470 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNA1Q09470 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNA1Q09470 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.74■□□□□ 0.91
KCNA1Q09470 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KCNA1Q09470 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KCNA1Q09470 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.74■□□□□ 0.91
KCNA1Q09470 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.74■□□□□ 0.91
KCNA1Q09470 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.74■□□□□ 0.91
KCNA1Q09470 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNA1Q09470 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KCNA1Q09470 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNA1Q09470 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNA1Q09470 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNA1Q09470 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNA1Q09470 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA1Q09470 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
KCNA1Q09470 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNA1Q09470 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA1Q09470 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.73■□□□□ 0.91
KCNA1Q09470 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.73■□□□□ 0.91
KCNA1Q09470 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA1Q09470 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.73■□□□□ 0.91
KCNA1Q09470 MIR4674-201ENST00000582457 87 ntBASIC20.73■□□□□ 0.91
KCNA1Q09470 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA1Q09470 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.73■□□□□ 0.91
KCNA1Q09470 AL020996.1-203ENST00000536896 2307 ntBASIC20.73■□□□□ 0.91
KCNA1Q09470 KRT8P32-201ENST00000512863 1461 ntBASIC20.73■□□□□ 0.91
KCNA1Q09470 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.73■□□□□ 0.91
KCNA1Q09470 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA1Q09470 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA1Q09470 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA1Q09470 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA1Q09470 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNA1Q09470 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KCNA1Q09470 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNA1Q09470 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
KCNA1Q09470 AC087499.1-201ENST00000418141 1075 ntBASIC20.72■□□□□ 0.91
KCNA1Q09470 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.72■□□□□ 0.91
KCNA1Q09470 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNA1Q09470 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
KCNA1Q09470 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNA1Q09470 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNA1Q09470 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KCNA1Q09470 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA1Q09470 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNA1Q09470 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA1Q09470 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNA1Q09470 GPAT2P1-201ENST00000444924 1672 ntBASIC20.71■□□□□ 0.91
KCNA1Q09470 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA1Q09470 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
KCNA1Q09470 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.71■□□□□ 0.91
KCNA1Q09470 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.71■□□□□ 0.91
KCNA1Q09470 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNA1Q09470 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNA1Q09470 CA15P1-201ENST00000481698 905 ntBASIC20.71■□□□□ 0.91
KCNA1Q09470 AC083906.6-201ENST00000641366 219 ntBASIC20.71■□□□□ 0.91
KCNA1Q09470 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA1Q09470 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA1Q09470 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNA1Q09470 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNA1Q09470 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms