Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.06■□□□□ 0.64
PRAMEP78395 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEP78395 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.06■□□□□ 0.64
PRAMEP78395 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.06■□□□□ 0.64
PRAMEP78395 AL158047.1-201ENST00000445918 881 ntBASIC19.06■□□□□ 0.64
PRAMEP78395 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.06■□□□□ 0.64
PRAMEP78395 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PRAMEP78395 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.06■□□□□ 0.64
PRAMEP78395 AC073195.1-201ENST00000607241 877 ntBASIC19.06■□□□□ 0.64
PRAMEP78395 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEP78395 AL031985.4-201ENST00000642138 673 ntBASIC19.06■□□□□ 0.64
PRAMEP78395 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.06■□□□□ 0.64
PRAMEP78395 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEP78395 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEP78395 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEP78395 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PRAMEP78395 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
PRAMEP78395 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PRAMEP78395 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEP78395 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.05■□□□□ 0.64
PRAMEP78395 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PRAMEP78395 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEP78395 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.05■□□□□ 0.64
PRAMEP78395 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PRAMEP78395 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.05■□□□□ 0.64
PRAMEP78395 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PRAMEP78395 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 AL135905.2-201ENST00000584934 1404 ntBASIC19.05■□□□□ 0.64
PRAMEP78395 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEP78395 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
PRAMEP78395 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.04■□□□□ 0.64
PRAMEP78395 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
PRAMEP78395 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
PRAMEP78395 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.04■□□□□ 0.64
PRAMEP78395 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.04■□□□□ 0.64
PRAMEP78395 AC098590.1-201ENST00000468126 897 ntBASIC19.04■□□□□ 0.64
PRAMEP78395 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRAMEP78395 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.04■□□□□ 0.64
PRAMEP78395 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEP78395 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.04■□□□□ 0.64
PRAMEP78395 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PRAMEP78395 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEP78395 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PRAMEP78395 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.03■□□□□ 0.64
PRAMEP78395 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.03■□□□□ 0.64
PRAMEP78395 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PRAMEP78395 AC004951.3-201ENST00000418645 1148 ntBASIC19.03■□□□□ 0.64
PRAMEP78395 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms