Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CRYGFP-201ENST00000418459 633 ntBASIC19.1■□□□□ 0.65
WNT3AP56704 RBM17P1-201ENST00000453646 1190 ntBASIC19.1■□□□□ 0.65
WNT3AP56704 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.1■□□□□ 0.65
WNT3AP56704 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 AL031598.1-201ENST00000561511 1773 ntBASIC19.1■□□□□ 0.65
WNT3AP56704 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.1■□□□□ 0.65
WNT3AP56704 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
WNT3AP56704 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.1■□□□□ 0.65
WNT3AP56704 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
WNT3AP56704 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.1■□□□□ 0.65
WNT3AP56704 AL512353.2-201ENST00000448759 1962 ntBASIC19.1■□□□□ 0.65
WNT3AP56704 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
WNT3AP56704 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
WNT3AP56704 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
WNT3AP56704 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.09■□□□□ 0.65
WNT3AP56704 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
WNT3AP56704 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
WNT3AP56704 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.09■□□□□ 0.65
WNT3AP56704 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.09■□□□□ 0.65
WNT3AP56704 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.09■□□□□ 0.65
WNT3AP56704 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
WNT3AP56704 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
WNT3AP56704 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.09■□□□□ 0.65
WNT3AP56704 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.09■□□□□ 0.65
WNT3AP56704 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
WNT3AP56704 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
WNT3AP56704 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
WNT3AP56704 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
WNT3AP56704 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
WNT3AP56704 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
WNT3AP56704 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
WNT3AP56704 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.09■□□□□ 0.65
WNT3AP56704 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
WNT3AP56704 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
WNT3AP56704 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
WNT3AP56704 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
WNT3AP56704 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
WNT3AP56704 KRT17P2-201ENST00000300992 1314 ntBASIC19.08■□□□□ 0.65
WNT3AP56704 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
WNT3AP56704 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
WNT3AP56704 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.08■□□□□ 0.64
WNT3AP56704 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
WNT3AP56704 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.08■□□□□ 0.64
WNT3AP56704 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
WNT3AP56704 AC093827.2-201ENST00000512654 315 ntBASIC19.08■□□□□ 0.64
WNT3AP56704 MIR4497-201ENST00000583208 89 ntBASIC19.08■□□□□ 0.64
WNT3AP56704 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.08■□□□□ 0.64
WNT3AP56704 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.08■□□□□ 0.64
WNT3AP56704 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
WNT3AP56704 AC066615.1-201ENST00000640911 628 ntBASIC19.08■□□□□ 0.64
WNT3AP56704 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
WNT3AP56704 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
WNT3AP56704 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
WNT3AP56704 KRT8P32-201ENST00000512863 1461 ntBASIC19.08■□□□□ 0.64
WNT3AP56704 AC079598.2-202ENST00000546624 1451 ntBASIC19.08■□□□□ 0.64
WNT3AP56704 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
WNT3AP56704 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
WNT3AP56704 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
WNT3AP56704 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
WNT3AP56704 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 UNC93B2-201ENST00000285383 730 ntBASIC19.07■□□□□ 0.64
WNT3AP56704 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
WNT3AP56704 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 AP005242.2-201ENST00000580065 1175 ntBASIC19.07■□□□□ 0.64
WNT3AP56704 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.07■□□□□ 0.64
WNT3AP56704 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
WNT3AP56704 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
WNT3AP56704 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.07■□□□□ 0.64
WNT3AP56704 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.06■□□□□ 0.64
WNT3AP56704 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.06■□□□□ 0.64
WNT3AP56704 Z98044.1-201ENST00000632503 1764 ntBASIC19.06■□□□□ 0.64
WNT3AP56704 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
WNT3AP56704 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms