Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDH4P55283 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.31■□□□□ 0.68
CDH4P55283 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.31■□□□□ 0.68
CDH4P55283 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH4P55283 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH4P55283 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDH4P55283 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH4P55283 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDH4P55283 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDH4P55283 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDH4P55283 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDH4P55283 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH4P55283 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH4P55283 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH4P55283 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDH4P55283 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDH4P55283 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDH4P55283 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH4P55283 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
CDH4P55283 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.3■□□□□ 0.68
CDH4P55283 MIR3180-5-201ENST00000583743 153 ntBASIC19.3■□□□□ 0.68
CDH4P55283 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDH4P55283 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH4P55283 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDH4P55283 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH4P55283 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH4P55283 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH4P55283 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH4P55283 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH4P55283 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDH4P55283 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH4P55283 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CDH4P55283 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH4P55283 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.29■□□□□ 0.68
CDH4P55283 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDH4P55283 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH4P55283 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH4P55283 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH4P55283 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDH4P55283 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH4P55283 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CDH4P55283 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH4P55283 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH4P55283 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CDH4P55283 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH4P55283 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.28■□□□□ 0.68
CDH4P55283 NEK4P2-201ENST00000580004 1012 ntBASIC19.28■□□□□ 0.68
CDH4P55283 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.28■□□□□ 0.68
CDH4P55283 AC068587.9-201ENST00000641814 219 ntBASIC19.28■□□□□ 0.68
CDH4P55283 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDH4P55283 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CDH4P55283 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CDH4P55283 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDH4P55283 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH4P55283 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH4P55283 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH4P55283 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH4P55283 AC036111.1-201ENST00000533973 1582 ntBASIC19.27■□□□□ 0.68
CDH4P55283 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH4P55283 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms