Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCKAP1LP55160 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NCKAP1LP55160 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.68■□□□□ 0.9
NCKAP1LP55160 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.68■□□□□ 0.9
NCKAP1LP55160 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.68■□□□□ 0.9
NCKAP1LP55160 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NCKAP1LP55160 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCKAP1LP55160 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCKAP1LP55160 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCKAP1LP55160 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCKAP1LP55160 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCKAP1LP55160 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NCKAP1LP55160 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCKAP1LP55160 MTMR9LP-203ENST00000426597 1545 ntBASIC20.68■□□□□ 0.9
NCKAP1LP55160 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.68■□□□□ 0.9
NCKAP1LP55160 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.68■□□□□ 0.9
NCKAP1LP55160 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCKAP1LP55160 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCKAP1LP55160 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.67■□□□□ 0.9
NCKAP1LP55160 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 AC008556.1-201ENST00000610908 2040 ntBASIC20.67■□□□□ 0.9
NCKAP1LP55160 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 AC113347.1-201ENST00000413321 391 ntBASIC20.67■□□□□ 0.9
NCKAP1LP55160 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.67■□□□□ 0.9
NCKAP1LP55160 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.67■□□□□ 0.9
NCKAP1LP55160 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.67■□□□□ 0.9
NCKAP1LP55160 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.67■□□□□ 0.9
NCKAP1LP55160 AC005363.2-201ENST00000618631 242 ntBASIC20.67■□□□□ 0.9
NCKAP1LP55160 CR769767.2-201ENST00000622735 460 ntBASIC20.67■□□□□ 0.9
NCKAP1LP55160 KRT8P45-201ENST00000414328 1447 ntBASIC20.67■□□□□ 0.9
NCKAP1LP55160 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.67■□□□□ 0.9
NCKAP1LP55160 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.67■□□□□ 0.9
NCKAP1LP55160 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.67■□□□□ 0.9
NCKAP1LP55160 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCKAP1LP55160 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.67■□□□□ 0.9
NCKAP1LP55160 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 AC010203.1-204ENST00000548782 407 ntBASIC20.66■□□□□ 0.9
NCKAP1LP55160 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 WWOX-216ENST00000569818 525 ntBASIC20.66■□□□□ 0.9
NCKAP1LP55160 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.66■□□□□ 0.9
NCKAP1LP55160 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
NCKAP1LP55160 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCKAP1LP55160 AC098818.2-201ENST00000564925 2320 ntBASIC20.65■□□□□ 0.9
NCKAP1LP55160 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCKAP1LP55160 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NCKAP1LP55160 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCKAP1LP55160 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCKAP1LP55160 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.65■□□□□ 0.9
NCKAP1LP55160 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCKAP1LP55160 AC073508.3-201ENST00000619697 1419 ntBASIC20.65■□□□□ 0.9
NCKAP1LP55160 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.65■□□□□ 0.9
NCKAP1LP55160 TERF1P1-201ENST00000311003 1181 ntBASIC20.65■□□□□ 0.9
NCKAP1LP55160 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.65■□□□□ 0.9
NCKAP1LP55160 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCKAP1LP55160 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.65■□□□□ 0.9
NCKAP1LP55160 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCKAP1LP55160 MIR3180-5-201ENST00000583743 153 ntBASIC20.65■□□□□ 0.9
NCKAP1LP55160 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
NCKAP1LP55160 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCKAP1LP55160 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NCKAP1LP55160 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.65■□□□□ 0.9
NCKAP1LP55160 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCKAP1LP55160 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCKAP1LP55160 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
NCKAP1LP55160 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCKAP1LP55160 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NCKAP1LP55160 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCKAP1LP55160 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms