Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.27■□□□□ 0.68
ATXN3P54252 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.27■□□□□ 0.68
ATXN3P54252 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.27■□□□□ 0.68
ATXN3P54252 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.27■□□□□ 0.68
ATXN3P54252 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATXN3P54252 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
ATXN3P54252 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATXN3P54252 AC005332.7-201ENST00000614046 2005 ntBASIC19.27■□□□□ 0.67
ATXN3P54252 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATXN3P54252 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
ATXN3P54252 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATXN3P54252 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.26■□□□□ 0.67
ATXN3P54252 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATXN3P54252 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.26■□□□□ 0.67
ATXN3P54252 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATXN3P54252 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.26■□□□□ 0.67
ATXN3P54252 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.26■□□□□ 0.67
ATXN3P54252 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATXN3P54252 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATXN3P54252 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATXN3P54252 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATXN3P54252 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATXN3P54252 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ATXN3P54252 SLC25A1P2-201ENST00000430693 912 ntBASIC19.26■□□□□ 0.67
ATXN3P54252 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.26■□□□□ 0.67
ATXN3P54252 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.26■□□□□ 0.67
ATXN3P54252 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.26■□□□□ 0.67
ATXN3P54252 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.26■□□□□ 0.67
ATXN3P54252 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.26■□□□□ 0.67
ATXN3P54252 AL512604.3-201ENST00000569583 964 ntBASIC19.26■□□□□ 0.67
ATXN3P54252 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATXN3P54252 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATXN3P54252 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATXN3P54252 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.26■□□□□ 0.67
ATXN3P54252 RCC2P6-201ENST00000526625 1557 ntBASIC19.26■□□□□ 0.67
ATXN3P54252 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATXN3P54252 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
ATXN3P54252 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.26■□□□□ 0.67
ATXN3P54252 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
ATXN3P54252 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.25■□□□□ 0.67
ATXN3P54252 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ATXN3P54252 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.25■□□□□ 0.67
ATXN3P54252 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.25■□□□□ 0.67
ATXN3P54252 NEFHP1-201ENST00000412845 2629 ntBASIC19.25■□□□□ 0.67
ATXN3P54252 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATXN3P54252 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATXN3P54252 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.25■□□□□ 0.67
ATXN3P54252 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATXN3P54252 AC009947.2-201ENST00000444014 672 ntBASIC19.25■□□□□ 0.67
ATXN3P54252 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.25■□□□□ 0.67
ATXN3P54252 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ATXN3P54252 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
ATXN3P54252 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATXN3P54252 AL121894.2-201ENST00000602977 491 ntBASIC19.25■□□□□ 0.67
ATXN3P54252 MYC-208ENST00000641036 567 ntBASIC19.25■□□□□ 0.67
ATXN3P54252 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ATXN3P54252 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.25■□□□□ 0.67
ATXN3P54252 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.25■□□□□ 0.67
ATXN3P54252 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3P54252 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3P54252 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATXN3P54252 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATXN3P54252 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.24■□□□□ 0.67
ATXN3P54252 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATXN3P54252 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.24■□□□□ 0.67
ATXN3P54252 TFP1-202ENST00000475455 1573 ntBASIC19.24■□□□□ 0.67
ATXN3P54252 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATXN3P54252 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3P54252 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.24■□□□□ 0.67
ATXN3P54252 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3P54252 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3P54252 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3P54252 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3P54252 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.24■□□□□ 0.67
ATXN3P54252 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
ATXN3P54252 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.24■□□□□ 0.67
ATXN3P54252 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.24■□□□□ 0.67
ATXN3P54252 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
ATXN3P54252 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.24■□□□□ 0.67
ATXN3P54252 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.24■□□□□ 0.67
ATXN3P54252 AL138966.2-201ENST00000621997 464 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms