Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDR1P51861 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR1P51861 AL158211.5-201ENST00000623583 2518 ntBASIC20.66■□□□□ 0.9
CDR1P51861 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDR1P51861 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CDR1P51861 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR1P51861 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.65■□□□□ 0.9
CDR1P51861 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.65■□□□□ 0.9
CDR1P51861 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDR1P51861 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR1P51861 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR1P51861 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.65■□□□□ 0.9
CDR1P51861 UNC93B2-201ENST00000285383 730 ntBASIC20.65■□□□□ 0.9
CDR1P51861 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDR1P51861 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.65■□□□□ 0.9
CDR1P51861 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.65■□□□□ 0.9
CDR1P51861 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.65■□□□□ 0.9
CDR1P51861 LINC01023-201ENST00000606054 436 ntBASIC20.65■□□□□ 0.9
CDR1P51861 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CDR1P51861 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDR1P51861 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDR1P51861 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR1P51861 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.65■□□□□ 0.9
CDR1P51861 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDR1P51861 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
CDR1P51861 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.64■□□□□ 0.9
CDR1P51861 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDR1P51861 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDR1P51861 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.64■□□□□ 0.89
CDR1P51861 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDR1P51861 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDR1P51861 AC125437.2-201ENST00000625180 2167 ntBASIC20.64■□□□□ 0.89
CDR1P51861 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDR1P51861 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.64■□□□□ 0.89
CDR1P51861 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.64■□□□□ 0.89
CDR1P51861 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.64■□□□□ 0.89
CDR1P51861 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDR1P51861 AL031985.4-201ENST00000642138 673 ntBASIC20.64■□□□□ 0.89
CDR1P51861 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.64■□□□□ 0.89
CDR1P51861 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDR1P51861 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDR1P51861 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDR1P51861 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.64■□□□□ 0.89
CDR1P51861 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.63■□□□□ 0.89
CDR1P51861 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDR1P51861 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.63■□□□□ 0.89
CDR1P51861 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.63■□□□□ 0.89
CDR1P51861 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.63■□□□□ 0.89
CDR1P51861 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.63■□□□□ 0.89
CDR1P51861 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDR1P51861 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.63■□□□□ 0.89
CDR1P51861 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.63■□□□□ 0.89
CDR1P51861 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.63■□□□□ 0.89
CDR1P51861 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
CDR1P51861 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.63■□□□□ 0.89
CDR1P51861 AL445675.2-201ENST00000620291 557 ntBASIC20.63■□□□□ 0.89
CDR1P51861 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDR1P51861 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.63■□□□□ 0.89
CDR1P51861 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDR1P51861 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDR1P51861 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDR1P51861 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDR1P51861 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDR1P51861 KRT8P8-201ENST00000434750 1448 ntBASIC20.62■□□□□ 0.89
CDR1P51861 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR1P51861 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR1P51861 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDR1P51861 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.62■□□□□ 0.89
CDR1P51861 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR1P51861 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR1P51861 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR1P51861 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDR1P51861 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR1P51861 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.62■□□□□ 0.89
CDR1P51861 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR1P51861 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.62■□□□□ 0.89
CDR1P51861 B3GAT3P1-201ENST00000471720 806 ntBASIC20.62■□□□□ 0.89
CDR1P51861 AC116562.2-201ENST00000507042 360 ntBASIC20.62■□□□□ 0.89
CDR1P51861 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.62■□□□□ 0.89
CDR1P51861 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.62■□□□□ 0.89
CDR1P51861 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.62■□□□□ 0.89
CDR1P51861 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.62■□□□□ 0.89
CDR1P51861 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR1P51861 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDR1P51861 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.62■□□□□ 0.89
CDR1P51861 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.62■□□□□ 0.89
CDR1P51861 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.61■□□□□ 0.89
CDR1P51861 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms