Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.86■□□□□ 0.93
GPC3P51654 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GPC3P51654 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
GPC3P51654 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
GPC3P51654 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC3P51654 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.85■□□□□ 0.93
GPC3P51654 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GPC3P51654 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.85■□□□□ 0.93
GPC3P51654 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.85■□□□□ 0.93
GPC3P51654 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC3P51654 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC3P51654 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC3P51654 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
GPC3P51654 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
GPC3P51654 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC3P51654 AL031133.1-201ENST00000406807 723 ntBASIC20.85■□□□□ 0.93
GPC3P51654 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
GPC3P51654 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.85■□□□□ 0.93
GPC3P51654 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.85■□□□□ 0.93
GPC3P51654 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.85■□□□□ 0.93
GPC3P51654 NEK4P2-201ENST00000580004 1012 ntBASIC20.85■□□□□ 0.93
GPC3P51654 CR769767.2-201ENST00000622735 460 ntBASIC20.85■□□□□ 0.93
GPC3P51654 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC3P51654 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.85■□□□□ 0.93
GPC3P51654 TEX21P-204ENST00000641479 1693 ntBASIC20.85■□□□□ 0.93
GPC3P51654 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GPC3P51654 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC3P51654 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.85■□□□□ 0.93
GPC3P51654 AIRN-201ENST00000601203 4374 ntBASIC20.85■□□□□ 0.93
GPC3P51654 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC3P51654 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.85■□□□□ 0.93
GPC3P51654 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.85■□□□□ 0.93
GPC3P51654 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
GPC3P51654 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.84■□□□□ 0.93
GPC3P51654 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.84■□□□□ 0.93
GPC3P51654 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 GPAT2P1-201ENST00000444924 1672 ntBASIC20.84■□□□□ 0.93
GPC3P51654 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
GPC3P51654 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.84■□□□□ 0.93
GPC3P51654 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
GPC3P51654 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.84■□□□□ 0.93
GPC3P51654 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.84■□□□□ 0.93
GPC3P51654 AP000523.1-201ENST00000398242 1049 ntBASIC20.84■□□□□ 0.93
GPC3P51654 HOMER2P1-201ENST00000455653 964 ntBASIC20.84■□□□□ 0.93
GPC3P51654 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.84■□□□□ 0.93
GPC3P51654 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
GPC3P51654 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
GPC3P51654 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.84■□□□□ 0.93
GPC3P51654 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
GPC3P51654 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.84■□□□□ 0.93
GPC3P51654 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
GPC3P51654 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC3P51654 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC3P51654 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC3P51654 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GPC3P51654 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC3P51654 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.83■□□□□ 0.93
GPC3P51654 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC3P51654 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC3P51654 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
GPC3P51654 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GPC3P51654 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.83■□□□□ 0.93
GPC3P51654 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GPC3P51654 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.83■□□□□ 0.93
GPC3P51654 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.83■□□□□ 0.93
GPC3P51654 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.83■□□□□ 0.93
GPC3P51654 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.83■□□□□ 0.93
GPC3P51654 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
GPC3P51654 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
GPC3P51654 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.83■□□□□ 0.93
GPC3P51654 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.92
GPC3P51654 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GPC3P51654 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GPC3P51654 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC3P51654 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC3P51654 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GPC3P51654 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC3P51654 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC3P51654 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.82■□□□□ 0.92
GPC3P51654 KRT8P3-201ENST00000519669 1449 ntBASIC20.82■□□□□ 0.92
GPC3P51654 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
GPC3P51654 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC3P51654 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
GPC3P51654 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.82■□□□□ 0.92
GPC3P51654 AL359075.1-203ENST00000462729 1002 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms