Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP9P49458 AC106820.2-201ENST00000563775 3264 ntBASIC16.76■□□□□ 0.27
SRP9P49458 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.75■□□□□ 0.27
SRP9P49458 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.75■□□□□ 0.27
SRP9P49458 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.75■□□□□ 0.27
SRP9P49458 AL031598.1-201ENST00000561511 1773 ntBASIC16.75■□□□□ 0.27
SRP9P49458 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.75■□□□□ 0.27
SRP9P49458 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 ABHD17AP1-201ENST00000358206 933 ntBASIC16.75■□□□□ 0.27
SRP9P49458 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SRP9P49458 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.75■□□□□ 0.27
SRP9P49458 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.75■□□□□ 0.27
SRP9P49458 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.75■□□□□ 0.27
SRP9P49458 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SRP9P49458 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SRP9P49458 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.75■□□□□ 0.27
SRP9P49458 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.75■□□□□ 0.27
SRP9P49458 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SRP9P49458 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.75■□□□□ 0.27
SRP9P49458 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SRP9P49458 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.75■□□□□ 0.27
SRP9P49458 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP9P49458 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
SRP9P49458 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.74■□□□□ 0.27
SRP9P49458 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.74■□□□□ 0.27
SRP9P49458 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SRP9P49458 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.74■□□□□ 0.27
SRP9P49458 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
SRP9P49458 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.74■□□□□ 0.27
SRP9P49458 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.74■□□□□ 0.27
SRP9P49458 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.74■□□□□ 0.27
SRP9P49458 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.74■□□□□ 0.27
SRP9P49458 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.74■□□□□ 0.27
SRP9P49458 MTDHP1-201ENST00000605323 784 ntBASIC16.74■□□□□ 0.27
SRP9P49458 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP9P49458 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.73■□□□□ 0.27
SRP9P49458 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.73■□□□□ 0.27
SRP9P49458 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SRP9P49458 TFP1-202ENST00000475455 1573 ntBASIC16.73■□□□□ 0.27
SRP9P49458 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.73■□□□□ 0.27
SRP9P49458 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 AC239809.2-201ENST00000415381 517 ntBASIC16.73■□□□□ 0.27
SRP9P49458 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.73■□□□□ 0.27
SRP9P49458 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.73■□□□□ 0.27
SRP9P49458 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.73■□□□□ 0.27
SRP9P49458 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.73■□□□□ 0.27
SRP9P49458 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.73■□□□□ 0.27
SRP9P49458 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SRP9P49458 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.73■□□□□ 0.27
SRP9P49458 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.73■□□□□ 0.27
SRP9P49458 RN7SL471P-201ENST00000580476 299 ntBASIC16.73■□□□□ 0.27
SRP9P49458 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.73■□□□□ 0.27
SRP9P49458 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SRP9P49458 AP006587.1-201ENST00000534129 1502 ntBASIC16.73■□□□□ 0.27
SRP9P49458 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.73■□□□□ 0.27
SRP9P49458 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms