Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC9A3P48764 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC9A3P48764 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC9A3P48764 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC9A3P48764 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC9A3P48764 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC9A3P48764 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC9A3P48764 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC9A3P48764 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC9A3P48764 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC9A3P48764 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC9A3P48764 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC9A3P48764 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC9A3P48764 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC9A3P48764 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC9A3P48764 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC9A3P48764 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC9A3P48764 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 TSPY21P-201ENST00000433481 731 ntBASIC17.31■□□□□ 0.36
SLC9A3P48764 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC9A3P48764 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC9A3P48764 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC9A3P48764 AC090192.1-201ENST00000517740 490 ntBASIC17.31■□□□□ 0.36
SLC9A3P48764 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC9A3P48764 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC9A3P48764 AC004264.1-201ENST00000608354 794 ntBASIC17.31■□□□□ 0.36
SLC9A3P48764 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC9A3P48764 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC9A3P48764 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC9A3P48764 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC9A3P48764 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC9A3P48764 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SLC9A3P48764 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 NBPF21P-201ENST00000425093 1451 ntBASIC17.31■□□□□ 0.36
SLC9A3P48764 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC9A3P48764 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 AL133373.2-201ENST00000623187 2828 ntBASIC17.3■□□□□ 0.36
SLC9A3P48764 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SLC9A3P48764 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC9A3P48764 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC9A3P48764 AL355802.2-201ENST00000402069 882 ntBASIC17.3■□□□□ 0.36
SLC9A3P48764 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC9A3P48764 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC9A3P48764 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC9A3P48764 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC9A3P48764 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SLC9A3P48764 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC9A3P48764 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC9A3P48764 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC9A3P48764 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC9A3P48764 Z98044.1-201ENST00000632503 1764 ntBASIC17.3■□□□□ 0.36
SLC9A3P48764 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC9A3P48764 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC9A3P48764 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC9A3P48764 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC9A3P48764 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SLC9A3P48764 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC9A3P48764 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms