Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
GABRA4P48169 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.91■□□□□ 0.46
GABRA4P48169 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GABRA4P48169 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.91■□□□□ 0.46
GABRA4P48169 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
GABRA4P48169 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.91■□□□□ 0.46
GABRA4P48169 KRT18P38-201ENST00000449496 1282 ntBASIC17.91■□□□□ 0.46
GABRA4P48169 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.91■□□□□ 0.46
GABRA4P48169 HOMER2P1-201ENST00000455653 964 ntBASIC17.91■□□□□ 0.46
GABRA4P48169 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.91■□□□□ 0.46
GABRA4P48169 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.91■□□□□ 0.46
GABRA4P48169 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.91■□□□□ 0.46
GABRA4P48169 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.91■□□□□ 0.46
GABRA4P48169 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.91■□□□□ 0.46
GABRA4P48169 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.91■□□□□ 0.46
GABRA4P48169 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.91■□□□□ 0.46
GABRA4P48169 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GABRA4P48169 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABRA4P48169 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
GABRA4P48169 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 AC008556.1-201ENST00000610908 2040 ntBASIC17.9■□□□□ 0.46
GABRA4P48169 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.9■□□□□ 0.46
GABRA4P48169 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.9■□□□□ 0.46
GABRA4P48169 LINC01238-205ENST00000567549 1107 ntBASIC17.9■□□□□ 0.46
GABRA4P48169 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.9■□□□□ 0.46
GABRA4P48169 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.9■□□□□ 0.46
GABRA4P48169 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.9■□□□□ 0.46
GABRA4P48169 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.9■□□□□ 0.46
GABRA4P48169 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GABRA4P48169 AC116562.4-201ENST00000641316 2276 ntBASIC17.89■□□□□ 0.46
GABRA4P48169 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.89■□□□□ 0.46
GABRA4P48169 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
GABRA4P48169 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.89■□□□□ 0.45
GABRA4P48169 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
GABRA4P48169 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
GABRA4P48169 AL161938.1-201ENST00000569833 2180 ntBASIC17.89■□□□□ 0.45
GABRA4P48169 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.89■□□□□ 0.45
GABRA4P48169 AL031133.1-201ENST00000406807 723 ntBASIC17.89■□□□□ 0.45
GABRA4P48169 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.89■□□□□ 0.45
GABRA4P48169 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.89■□□□□ 0.45
GABRA4P48169 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.89■□□□□ 0.45
GABRA4P48169 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.89■□□□□ 0.45
GABRA4P48169 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.89■□□□□ 0.45
GABRA4P48169 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.89■□□□□ 0.45
GABRA4P48169 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.89■□□□□ 0.45
GABRA4P48169 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
GABRA4P48169 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.89■□□□□ 0.45
GABRA4P48169 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.89■□□□□ 0.45
GABRA4P48169 AC068587.9-201ENST00000641814 219 ntBASIC17.89■□□□□ 0.45
GABRA4P48169 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.89■□□□□ 0.45
GABRA4P48169 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.89■□□□□ 0.45
GABRA4P48169 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
GABRA4P48169 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
GABRA4P48169 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
GABRA4P48169 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
GABRA4P48169 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABRA4P48169 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
GABRA4P48169 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GABRA4P48169 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GABRA4P48169 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms