Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC6A12P48065 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC6A12P48065 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
SLC6A12P48065 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SLC6A12P48065 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC6A12P48065 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SLC6A12P48065 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SLC6A12P48065 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
SLC6A12P48065 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC6A12P48065 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC6A12P48065 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC6A12P48065 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC6A12P48065 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SLC6A12P48065 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
SLC6A12P48065 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.23■□□□□ 0.51
SLC6A12P48065 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC6A12P48065 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC6A12P48065 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC6A12P48065 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SLC6A12P48065 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC6A12P48065 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC6A12P48065 TSPY7P-201ENST00000431358 1114 ntBASIC18.23■□□□□ 0.51
SLC6A12P48065 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC6A12P48065 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC6A12P48065 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC6A12P48065 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC6A12P48065 AC008622.2-201ENST00000617006 1229 ntBASIC18.23■□□□□ 0.51
SLC6A12P48065 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC6A12P48065 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC6A12P48065 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC6A12P48065 RCC2P3-201ENST00000418112 1537 ntBASIC18.23■□□□□ 0.51
SLC6A12P48065 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
SLC6A12P48065 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC6A12P48065 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SLC6A12P48065 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 AP005242.2-201ENST00000580065 1175 ntBASIC18.22■□□□□ 0.51
SLC6A12P48065 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC6A12P48065 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC6A12P48065 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC6A12P48065 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC6A12P48065 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC6A12P48065 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC6A12P48065 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC6A12P48065 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC6A12P48065 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC6A12P48065 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC6A12P48065 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC6A12P48065 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A12P48065 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC6A12P48065 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A12P48065 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A12P48065 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC6A12P48065 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.21■□□□□ 0.51
SLC6A12P48065 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SLC6A12P48065 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A12P48065 CA15P1-201ENST00000481698 905 ntBASIC18.21■□□□□ 0.51
SLC6A12P48065 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC6A12P48065 MIR4785-201ENST00000585005 73 ntBASIC18.21■□□□□ 0.51
SLC6A12P48065 AP006294.2-201ENST00000641667 209 ntBASIC18.21■□□□□ 0.51
SLC6A12P48065 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A12P48065 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A12P48065 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A12P48065 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A12P48065 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC6A12P48065 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms