Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.08■□□□□ 0.8
SSR1P43307 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SSR1P43307 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SSR1P43307 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.08■□□□□ 0.8
SSR1P43307 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SSR1P43307 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SSR1P43307 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.07■□□□□ 0.8
SSR1P43307 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.07■□□□□ 0.8
SSR1P43307 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
SSR1P43307 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SSR1P43307 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.07■□□□□ 0.8
SSR1P43307 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.07■□□□□ 0.8
SSR1P43307 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
SSR1P43307 AL160286.2-201ENST00000567150 934 ntBASIC20.07■□□□□ 0.8
SSR1P43307 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SSR1P43307 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SSR1P43307 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.07■□□□□ 0.8
SSR1P43307 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.07■□□□□ 0.8
SSR1P43307 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
SSR1P43307 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SSR1P43307 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.07■□□□□ 0.8
SSR1P43307 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR1P43307 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SSR1P43307 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SSR1P43307 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.06■□□□□ 0.8
SSR1P43307 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.06■□□□□ 0.8
SSR1P43307 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.06■□□□□ 0.8
SSR1P43307 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.06■□□□□ 0.8
SSR1P43307 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.06■□□□□ 0.8
SSR1P43307 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SSR1P43307 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SSR1P43307 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SSR1P43307 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.06■□□□□ 0.8
SSR1P43307 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.06■□□□□ 0.8
SSR1P43307 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.06■□□□□ 0.8
SSR1P43307 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SSR1P43307 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.06■□□□□ 0.8
SSR1P43307 HLA-A-209ENST00000638375 975 ntBASIC20.06■□□□□ 0.8
SSR1P43307 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.06■□□□□ 0.8
SSR1P43307 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR1P43307 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.05■□□□□ 0.8
SSR1P43307 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.05■□□□□ 0.8
SSR1P43307 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR1P43307 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR1P43307 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR1P43307 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SSR1P43307 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.05■□□□□ 0.8
SSR1P43307 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.05■□□□□ 0.8
SSR1P43307 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR1P43307 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.05■□□□□ 0.8
SSR1P43307 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.05■□□□□ 0.8
SSR1P43307 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.05■□□□□ 0.8
SSR1P43307 CD99P1-205ENST00000527459 561 ntBASIC20.05■□□□□ 0.8
SSR1P43307 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SSR1P43307 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR1P43307 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR1P43307 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR1P43307 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.05■□□□□ 0.8
SSR1P43307 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR1P43307 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR1P43307 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.05■□□□□ 0.8
SSR1P43307 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.05■□□□□ 0.8
SSR1P43307 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR1P43307 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR1P43307 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SSR1P43307 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSR1P43307 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSR1P43307 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSR1P43307 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR1P43307 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.04■□□□□ 0.8
SSR1P43307 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
SSR1P43307 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.04■□□□□ 0.8
SSR1P43307 AC073648.6-201ENST00000641589 218 ntBASIC20.04■□□□□ 0.8
SSR1P43307 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR1P43307 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR1P43307 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSR1P43307 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms