Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ATP2B1-209ENST00000551310 607 ntTSL 317.47■□□□□ 0.391e-6■■■□□ 18.8
MATR3P43243 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.935e-6■■■□□ 18.8
MATR3P43243 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.116e-6■■■□□ 18.8
MATR3P43243 ZC2HC1A-202ENST00000519307 601 ntTSL 53.77□□□□□ -1.816e-6■■■□□ 18.8
MATR3P43243 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.452e-7■■■□□ 18.8
MATR3P43243 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC15.39■□□□□ 0.055e-8■■■□□ 18.8
MATR3P43243 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC13.48□□□□□ -0.255e-8■■■□□ 18.8
MATR3P43243 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.275e-8■■■□□ 18.8
MATR3P43243 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.015e-7■■■□□ 18.8
MATR3P43243 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.015e-7■■■□□ 18.8
MATR3P43243 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.145e-7■■■□□ 18.8
MATR3P43243 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.771e-6■■■□□ 18.8
MATR3P43243 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.524e-6■■■□□ 18.8
MATR3P43243 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.094e-6■■■□□ 18.8
MATR3P43243 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.24e-6■■■□□ 18.8
MATR3P43243 SLC44A1-205ENST00000470972 10433 ntTSL 1 (best)13.62□□□□□ -0.234e-6■■■□□ 18.8
MATR3P43243 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.42e-6■■■□□ 18.8
MATR3P43243 DCP2-207ENST00000513585 1572 ntTSL 218.21■□□□□ 0.513e-7■■■□□ 18.8
MATR3P43243 DCP2-205ENST00000510046 369 ntTSL 215.47■□□□□ 0.073e-7■■■□□ 18.8
MATR3P43243 DCP2-203ENST00000504961 852 ntTSL 1 (best)14.22□□□□□ -0.133e-7■■■□□ 18.8
MATR3P43243 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC10.75□□□□□ -0.693e-7■■■□□ 18.8
MATR3P43243 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.023e-7■■■□□ 18.8
MATR3P43243 DCP2-206ENST00000512751 570 ntTSL 38.05□□□□□ -1.123e-7■■■□□ 18.8
MATR3P43243 TSNARE1-203ENST00000518928 940 ntTSL 315.39■□□□□ 0.052e-7■■■□□ 18.8
MATR3P43243 SIK3-211ENST00000485363 764 ntTSL 1 (best)17.37■□□□□ 0.374e-7■■■□□ 18.8
MATR3P43243 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC11.74□□□□□ -0.531e-6■■■□□ 18.8
MATR3P43243 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.43■■□□□ 1.182e-6■■■□□ 18.7
MATR3P43243 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.17■■□□□ 1.142e-6■■■□□ 18.7
MATR3P43243 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.33■■□□□ 1.012e-6■■■□□ 18.7
MATR3P43243 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.81■■□□□ 1.562e-6■■■□□ 18.7
MATR3P43243 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.742e-6■■■□□ 18.7
MATR3P43243 LPP-206ENST00000430340 521 ntTSL 312.04□□□□□ -0.489e-7■■■□□ 18.7
MATR3P43243 GMDS-209ENST00000531690 515 ntTSL 56.99□□□□□ -1.291e-6■■■□□ 18.7
MATR3P43243 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.021e-6■■■□□ 18.7
MATR3P43243 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.091e-6■■■□□ 18.7
MATR3P43243 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.251e-6■■■□□ 18.7
MATR3P43243 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC12.83□□□□□ -0.351e-6■■■□□ 18.7
MATR3P43243 RFX7-203ENST00000560792 518 ntAPPRIS ALT2 TSL 46.42□□□□□ -1.382e-6■■■□□ 18.7
MATR3P43243 LINC-PINT-206ENST00000435523 553 ntTSL 34.2□□□□□ -1.748e-7■■■□□ 18.7
MATR3P43243 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.08■■□□□ 1.771e-6■■■□□ 18.7
MATR3P43243 FKBP1B-204ENST00000438630 1137 ntTSL 1 (best)18■□□□□ 0.471e-6■■■□□ 18.7
MATR3P43243 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.271e-6■■■□□ 18.7
MATR3P43243 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.76□□□□□ -0.051e-6■■■□□ 18.7
MATR3P43243 FKBP1B-206ENST00000496149 1601 ntTSL 514.22□□□□□ -0.131e-6■■■□□ 18.7
MATR3P43243 MFSD2B-203ENST00000453731 674 ntTSL 311.54□□□□□ -0.561e-6■■■□□ 18.7
MATR3P43243 ZFAND6-218ENST00000561012 585 ntTSL 323.97■■□□□ 1.438e-7■■■□□ 18.7
MATR3P43243 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.358e-7■■■□□ 18.7
MATR3P43243 CSGALNACT1-216ENST00000524213 554 ntTSL 218.16■□□□□ 0.52e-6■■■□□ 18.7
MATR3P43243 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.14■□□□□ 0.498e-7■■■□□ 18.7
MATR3P43243 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.478e-7■■■□□ 18.7
MATR3P43243 ZFAND6-221ENST00000564367 582 ntTSL 317.79■□□□□ 0.448e-7■■■□□ 18.7
MATR3P43243 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.388e-7■■■□□ 18.7
MATR3P43243 CSGALNACT1-213ENST00000523262 792 ntTSL 217.34■□□□□ 0.372e-6■■■□□ 18.7
MATR3P43243 CSGALNACT1-204ENST00000517494 766 ntTSL 316.65■□□□□ 0.262e-6■■■□□ 18.7
MATR3P43243 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.198e-7■■■□□ 18.7
MATR3P43243 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.228e-7■■■□□ 18.7
MATR3P43243 ZFAND6-216ENST00000560470 558 ntTSL 410.12□□□□□ -0.798e-7■■■□□ 18.7
MATR3P43243 CSGALNACT1-209ENST00000522573 405 ntTSL 59.09□□□□□ -0.952e-6■■■□□ 18.7
MATR3P43243 PHF14-205ENST00000473050 695 ntTSL 26.26□□□□□ -1.414e-7■■■□□ 18.7
MATR3P43243 ZFAND6-214ENST00000560228 492 ntTSL 35.75□□□□□ -1.498e-7■■■□□ 18.7
MATR3P43243 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.528e-7■■■□□ 18.7
MATR3P43243 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.558e-7■■■□□ 18.7
MATR3P43243 ZFAND6-209ENST00000558724 621 ntTSL 55.08□□□□□ -1.68e-7■■■□□ 18.7
MATR3P43243 ZFAND6-217ENST00000560976 560 ntTSL 45.08□□□□□ -1.68e-7■■■□□ 18.7
MATR3P43243 ZFAND6-210ENST00000558997 741 ntTSL 54.67□□□□□ -1.668e-7■■■□□ 18.7
MATR3P43243 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.678e-7■■■□□ 18.7
MATR3P43243 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.42□□□□□ -1.78e-7■■■□□ 18.7
MATR3P43243 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.768e-7■■■□□ 18.7
MATR3P43243 ZFAND6-206ENST00000558390 566 ntTSL 43.87□□□□□ -1.798e-7■■■□□ 18.7
MATR3P43243 ZFAND6-202ENST00000557793 532 ntTSL 23.8□□□□□ -1.88e-7■■■□□ 18.7
MATR3P43243 ZFAND6-215ENST00000560392 568 ntTSL 43.63□□□□□ -1.838e-7■■■□□ 18.7
MATR3P43243 ZFAND6-205ENST00000558272 583 ntTSL 33.1□□□□□ -1.918e-7■■■□□ 18.7
MATR3P43243 PHF14-211ENST00000493922 408 ntTSL 32.17□□□□□ -2.064e-7■■■□□ 18.7
MATR3P43243 PHF14-203ENST00000469407 1991 ntTSL 21.18□□□□□ -2.224e-7■■■□□ 18.7
MATR3P43243 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.292e-6■■■□□ 18.7
MATR3P43243 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.692e-6■■■□□ 18.7
MATR3P43243 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.762e-6■■■□□ 18.7
MATR3P43243 CFI-207ENST00000618244 1345 ntTSL 5 BASIC8.88□□□□□ -0.997e-7■■■□□ 18.7
MATR3P43243 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.157e-7■■■□□ 18.7
MATR3P43243 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.237e-7■■■□□ 18.7
MATR3P43243 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.557e-7■■■□□ 18.7
MATR3P43243 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.19■□□□□ 0.821e-6■■■□□ 18.7
MATR3P43243 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.99■□□□□ 0.471e-6■■■□□ 18.7
MATR3P43243 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.161e-6■■■□□ 18.7
MATR3P43243 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.69□□□□□ -1.341e-6■■■□□ 18.7
MATR3P43243 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.68□□□□□ -1.51e-6■■■□□ 18.7
MATR3P43243 L3MBTL4-201ENST00000317931 3560 ntTSL 5 BASIC13.03□□□□□ -0.328e-7■■■□□ 18.7
MATR3P43243 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.94■□□□□ 0.785e-7■■■□□ 18.7
MATR3P43243 KMT2E-209ENST00000478990 1500 ntTSL 518.63■□□□□ 0.575e-7■■■□□ 18.7
MATR3P43243 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.475e-7■■■□□ 18.7
MATR3P43243 KMT2E-203ENST00000334884 6840 ntTSL 517.94■□□□□ 0.465e-7■■■□□ 18.7
MATR3P43243 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.415e-7■■■□□ 18.7
MATR3P43243 KMT2E-212ENST00000482560 1759 ntTSL 56.66□□□□□ -1.345e-7■■■□□ 18.7
MATR3P43243 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.06■■□□□ 1.921e-6■■■□□ 18.7
MATR3P43243 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.91■■□□□ 1.741e-6■■■□□ 18.7
MATR3P43243 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.721e-6■■■□□ 18.7
MATR3P43243 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC14.13□□□□□ -0.151e-6■■■□□ 18.7
MATR3P43243 NDEL1-211ENST00000581679 582 ntTSL 44.09□□□□□ -1.751e-6■■■□□ 18.7
MATR3P43243 ST3GAL3-226ENST00000490502 592 ntTSL 315.48■□□□□ 0.077e-7■■■□□ 18.7
MATR3P43243 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.91■□□□□ 0.142e-6■■■□□ 18.7
Retrieved 100 of 16,209 protein–RNA pairs in 146 ms