RNA–Protein interactions for RNA: ENST00000581679.1

NDEL1-211, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-211ENST00000581679 AEBP2Q6ZN18 517 aaPredicted RBP16.73■□□□□ 0.27
NDEL1-211ENST00000581679 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
NDEL1-211ENST00000581679 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.13
NDEL1-211ENST00000581679 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
NDEL1-211ENST00000581679 FOXD1Q16676 465 aa13.19□□□□□ -0.3
NDEL1-211ENST00000581679 PLPPR3Q6T4P5 718 aa13.09□□□□□ -0.31
NDEL1-211ENST00000581679 PPP6R1Q9UPN7 881 aa12.61□□□□□ -0.39
NDEL1-211ENST00000581679 ADRA2BP18089 450 aa12.57□□□□□ -0.4
NDEL1-211ENST00000581679 PIAS4Q8N2W9 510 aaPredicted RBP12.38□□□□□ -0.43
NDEL1-211ENST00000581679 MSH5O43196 834 aa12.19□□□□□ -0.46
NDEL1-211ENST00000581679 PPP4R3CPQ6ZMV5 832 aa11.53□□□□□ -0.56
NDEL1-211ENST00000581679 SCAF1Q9H7N4 1312 aaKnown RBP11.46□□□□□ -0.57
NDEL1-211ENST00000581679 MAPK8IP2Q13387 824 aaPredicted RBP11.45□□□□□ -0.58
NDEL1-211ENST00000581679 DMRT2Q9Y5R5 561 aa11.32□□□□□ -0.6
NDEL1-211ENST00000581679 POTEDQ86YR6 584 aa11.31□□□□□ -0.6
NDEL1-211ENST00000581679 CNKSR2Q8WXI2 1034 aa11.23□□□□□ -0.61
NDEL1-211ENST00000581679 NCBP3Q53F19 620 aaKnown RBP11.16□□□□□ -0.62
NDEL1-211ENST00000581679 KCNA4P22459 653 aa11.13□□□□□ -0.63
NDEL1-211ENST00000581679 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
NDEL1-211ENST00000581679 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
NDEL1-211ENST00000581679 RNF216Q9NWF9 866 aaPredicted RBP11.04□□□□□ -0.64
NDEL1-211ENST00000581679 DNAJC5BQ9UF47 199 aa10.78□□□□□ -0.68
NDEL1-211ENST00000581679 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
NDEL1-211ENST00000581679 SLC4A1APQ9BWU0 796 aaKnown RBP10.56□□□□□ -0.72
NDEL1-211ENST00000581679 SLC4A2P04920 1241 aa10.47□□□□□ -0.73
NDEL1-211ENST00000581679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.47□□□□□ -0.732e-7■□□□□ 9.7
NDEL1-211ENST00000581679 RNF39Q9H2S5 420 aa10.45□□□□□ -0.74
NDEL1-211ENST00000581679 U3KPZ7 1027 aaPredicted RBP10.34□□□□□ -0.75
NDEL1-211ENST00000581679 C1QBPQ07021 282 aaKnown RBP10.3□□□□□ -0.76
NDEL1-211ENST00000581679 FOXD4L1Q9NU39 408 aa10.28□□□□□ -0.76
NDEL1-211ENST00000581679 ZBTB22O15209 634 aa10.27□□□□□ -0.77
NDEL1-211ENST00000581679 CACNB1Q02641 598 aaPredicted RBP10.21□□□□□ -0.77
NDEL1-211ENST00000581679 MYCNP04198 464 aaPredicted RBP10.19□□□□□ -0.78
NDEL1-211ENST00000581679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
NDEL1-211ENST00000581679 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
NDEL1-211ENST00000581679 EHMT2Q96KQ7 1210 aa10.11□□□□□ -0.79
NDEL1-211ENST00000581679 CSRNP3Q8WYN3 585 aa10.1□□□□□ -0.79
NDEL1-211ENST00000581679 SAMD1Q6SPF0 538 aaPredicted RBP10.09□□□□□ -0.79
NDEL1-211ENST00000581679 SPINK5Q9NQ38 1064 aaPredicted RBP10.07□□□□□ -0.8
NDEL1-211ENST00000581679 APLP2Q06481 763 aa10.03□□□□□ -0.8
NDEL1-211ENST00000581679 CAPN15O75808 1086 aa10□□□□□ -0.81
NDEL1-211ENST00000581679 ATF5Q9Y2D1 282 aaPredicted RBP9.95□□□□□ -0.82
NDEL1-211ENST00000581679 ZNF219Q9P2Y4 722 aaPredicted RBP9.94□□□□□ -0.82
NDEL1-211ENST00000581679 TRHP20396 242 aaPredicted RBP9.93□□□□□ -0.82
NDEL1-211ENST00000581679 ATXN8OSP0DMR3 200 aa9.92□□□□□ -0.82
NDEL1-211ENST00000581679 DSG3P32926 999 aa9.91□□□□□ -0.82
NDEL1-211ENST00000581679 ABCB7O75027 752 aa9.81□□□□□ -0.84
NDEL1-211ENST00000581679 POLA2Q14181 598 aa9.75□□□□□ -0.85
NDEL1-211ENST00000581679 ZBTB12Q9Y330 459 aaPredicted RBP9.57□□□□□ -0.88
NDEL1-211ENST00000581679 MKRN4PQ13434 485 aaPredicted RBP9.52□□□□□ -0.89
NDEL1-211ENST00000581679 FBLN2P98095 1184 aa9.48□□□□□ -0.89
NDEL1-211ENST00000581679 OSCARQ8IYS5 282 aa9.44□□□□□ -0.9
NDEL1-211ENST00000581679 RBM42Q9BTD8 480 aaKnown RBP9.41□□□□□ -0.9
NDEL1-211ENST00000581679 SPDYE2BA6NHP3 402 aa9.33□□□□□ -0.92
NDEL1-211ENST00000581679 SPDYE6P0CI01 402 aa9.33□□□□□ -0.92
NDEL1-211ENST00000581679 SPDYE2Q495Y8 402 aa9.33□□□□□ -0.92
NDEL1-211ENST00000581679 AKT1S1Q96B36 256 aa9.29□□□□□ -0.92
NDEL1-211ENST00000581679 SSUH2Q9Y2M2 353 aa9.27□□□□□ -0.93
NDEL1-211ENST00000581679 ZNF692Q9BU19 519 aaPredicted RBP9.25□□□□□ -0.93
NDEL1-211ENST00000581679 SPDYE4A6NLX3 237 aa9.2□□□□□ -0.94
NDEL1-211ENST00000581679 REM2Q8IYK8 340 aaPredicted RBP9.19□□□□□ -0.94
NDEL1-211ENST00000581679 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
NDEL1-211ENST00000581679 PITPNM1O00562 1244 aa9.1□□□□□ -0.95
NDEL1-211ENST00000581679 FKBP8Q14318 412 aa9.1□□□□□ -0.95
NDEL1-211ENST00000581679 PROM2Q8N271 834 aa9.1□□□□□ -0.95
NDEL1-211ENST00000581679 CHRDL2Q6WN34 429 aa9.07□□□□□ -0.96
NDEL1-211ENST00000581679 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
NDEL1-211ENST00000581679 CLEC11AQ9Y240 323 aa9.01□□□□□ -0.97
NDEL1-211ENST00000581679 FXR2P51116 673 aaKnown RBP eCLIP8.97□□□□□ -0.97
NDEL1-211ENST00000581679 PIP4P2Q8N4L2 257 aa8.95□□□□□ -0.98
NDEL1-211ENST00000581679 STAG3Q9UJ98 1225 aa8.95□□□□□ -0.98
NDEL1-211ENST00000581679 PRR29P0C7W0 189 aa8.92□□□□□ -0.98
NDEL1-211ENST00000581679 POTEHQ6S545 545 aa8.92□□□□□ -0.98
NDEL1-211ENST00000581679 PRKAR2AP13861 404 aaKnown RBP8.85□□□□□ -0.99
NDEL1-211ENST00000581679 CHADLQ6NUI6 762 aa8.83□□□□□ -1
NDEL1-211ENST00000581679 CREBZFQ9NS37 354 aa8.83□□□□□ -1
NDEL1-211ENST00000581679 FBXO3Q9UK99 471 aa8.79□□□□□ -1
NDEL1-211ENST00000581679 MNX1P50219 401 aaPredicted RBP8.74□□□□□ -1.01
NDEL1-211ENST00000581679 FARP1Q9Y4F1 1045 aaPredicted RBP8.74□□□□□ -1.01
NDEL1-211ENST00000581679 MIER1Q8N108 512 aa8.71□□□□□ -1.02
NDEL1-211ENST00000581679 VASPP50552 380 aaPredicted RBP8.7□□□□□ -1.02
NDEL1-211ENST00000581679 PLCD3Q8N3E9 789 aa8.68□□□□□ -1.02
NDEL1-211ENST00000581679 C19orf67A6NJJ6 358 aa8.67□□□□□ -1.02
NDEL1-211ENST00000581679 PLEKHG5O94827 1062 aa8.66□□□□□ -1.02
NDEL1-211ENST00000581679 HAX1O00165 279 aa8.64□□□□□ -1.03
NDEL1-211ENST00000581679 NPM1P06748 294 aaKnown RBP eCLIP8.63□□□□□ -1.03
NDEL1-211ENST00000581679 EVX2Q03828 476 aa8.62□□□□□ -1.03
NDEL1-211ENST00000581679 ZBTB47Q9UFB7 747 aaPredicted RBP8.61□□□□□ -1.03
NDEL1-211ENST00000581679 CD44P16070 742 aaKnown RBP8.59□□□□□ -1.03
NDEL1-211ENST00000581679 IFNLR1Q8IU57 520 aaPredicted RBP8.59□□□□□ -1.03
NDEL1-211ENST00000581679 NUBP1P53384 320 aa8.56□□□□□ -1.04
NDEL1-211ENST00000581679 RASEFQ8IZ41 740 aa8.54□□□□□ -1.04
NDEL1-211ENST00000581679 KLHL34Q8N239 644 aa8.53□□□□□ -1.04
NDEL1-211ENST00000581679 SP7Q8TDD2 431 aaPredicted RBP8.53□□□□□ -1.04
NDEL1-211ENST00000581679 ZRANB1Q9UGI0 708 aa8.52□□□□□ -1.05
NDEL1-211ENST00000581679 PAK3O75914 559 aaPredicted RBP8.5□□□□□ -1.05
NDEL1-211ENST00000581679 ZNF579Q8NAF0 562 aaKnown RBP8.5□□□□□ -1.05
NDEL1-211ENST00000581679 SPOCK2Q92563 424 aa8.48□□□□□ -1.05
NDEL1-211ENST00000581679 TSPYL2Q9H2G4 693 aaPredicted RBP8.48□□□□□ -1.05
NDEL1-211ENST00000581679 CCDC61Q9Y6R9 512 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 264.4 ms