Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPHP41219 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRPHP41219 KRT17P2-201ENST00000300992 1314 ntBASIC21.35■■□□□ 1.01
PRPHP41219 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PRPHP41219 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.35■■□□□ 1.01
PRPHP41219 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPHP41219 UNC93B2-201ENST00000285383 730 ntBASIC21.35■■□□□ 1.01
PRPHP41219 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PRPHP41219 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.35■■□□□ 1.01
PRPHP41219 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.35■■□□□ 1.01
PRPHP41219 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.35■■□□□ 1.01
PRPHP41219 MIR4497-201ENST00000583208 89 ntBASIC21.35■■□□□ 1.01
PRPHP41219 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPHP41219 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PRPHP41219 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.35■■□□□ 1.01
PRPHP41219 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.35■■□□□ 1.01
PRPHP41219 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PRPHP41219 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.35■■□□□ 1.01
PRPHP41219 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPHP41219 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PRPHP41219 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
PRPHP41219 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPHP41219 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.35■■□□□ 1.01
PRPHP41219 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPHP41219 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.34■■□□□ 1.01
PRPHP41219 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.34■■□□□ 1.01
PRPHP41219 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.34■■□□□ 1.01
PRPHP41219 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.34■■□□□ 1.01
PRPHP41219 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.34■■□□□ 1.01
PRPHP41219 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
PRPHP41219 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRPHP41219 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPHP41219 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.33■■□□□ 1.01
PRPHP41219 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRPHP41219 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PRPHP41219 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRPHP41219 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPHP41219 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPHP41219 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPHP41219 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PRPHP41219 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
PRPHP41219 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRPHP41219 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.33■■□□□ 1.01
PRPHP41219 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPHP41219 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPHP41219 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.33■■□□□ 1.01
PRPHP41219 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PRPHP41219 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.33■■□□□ 1.01
PRPHP41219 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRPHP41219 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.33■■□□□ 1.01
PRPHP41219 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.33■■□□□ 1.01
PRPHP41219 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PRPHP41219 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.33■■□□□ 1.01
PRPHP41219 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PRPHP41219 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.33■■□□□ 1
PRPHP41219 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PRPHP41219 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRPHP41219 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
PRPHP41219 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PRPHP41219 AC079598.2-202ENST00000546624 1451 ntBASIC21.32■■□□□ 1
PRPHP41219 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRPHP41219 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
PRPHP41219 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRPHP41219 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.32■■□□□ 1
PRPHP41219 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.32■■□□□ 1
PRPHP41219 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.32■■□□□ 1
PRPHP41219 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.32■■□□□ 1
PRPHP41219 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRPHP41219 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRPHP41219 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PRPHP41219 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PRPHP41219 CRYGFP-201ENST00000418459 633 ntBASIC21.32■■□□□ 1
PRPHP41219 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.32■■□□□ 1
PRPHP41219 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.32■■□□□ 1
PRPHP41219 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.32■■□□□ 1
PRPHP41219 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.32■■□□□ 1
PRPHP41219 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.32■■□□□ 1
PRPHP41219 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRPHP41219 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.32■■□□□ 1
PRPHP41219 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PRPHP41219 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.32■■□□□ 1
PRPHP41219 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PRPHP41219 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.32■■□□□ 1
PRPHP41219 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.32■■□□□ 1
PRPHP41219 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRPHP41219 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms