Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GDNFP39905 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.46■□□□□ 0.23
GDNFP39905 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GDNFP39905 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
GDNFP39905 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
GDNFP39905 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.45■□□□□ 0.22
GDNFP39905 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.45■□□□□ 0.22
GDNFP39905 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.45■□□□□ 0.22
GDNFP39905 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
GDNFP39905 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.45■□□□□ 0.22
GDNFP39905 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.45■□□□□ 0.22
GDNFP39905 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.45■□□□□ 0.22
GDNFP39905 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GDNFP39905 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 ANO7L1-203ENST00000602586 1720 ntBASIC16.45■□□□□ 0.22
GDNFP39905 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.45■□□□□ 0.22
GDNFP39905 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
GDNFP39905 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
GDNFP39905 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
GDNFP39905 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDNFP39905 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.44■□□□□ 0.22
GDNFP39905 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDNFP39905 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.44■□□□□ 0.22
GDNFP39905 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDNFP39905 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
GDNFP39905 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
GDNFP39905 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GDNFP39905 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
GDNFP39905 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.44■□□□□ 0.22
GDNFP39905 MIR4758-201ENST00000577688 71 ntBASIC16.44■□□□□ 0.22
GDNFP39905 MYC-209ENST00000641252 345 ntBASIC16.44■□□□□ 0.22
GDNFP39905 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDNFP39905 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDNFP39905 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.44■□□□□ 0.22
GDNFP39905 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDNFP39905 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.44■□□□□ 0.22
GDNFP39905 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDNFP39905 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDNFP39905 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
GDNFP39905 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
GDNFP39905 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GDNFP39905 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.43■□□□□ 0.22
GDNFP39905 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.43■□□□□ 0.22
GDNFP39905 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
GDNFP39905 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.43■□□□□ 0.22
GDNFP39905 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 AL355802.2-201ENST00000402069 882 ntBASIC16.43■□□□□ 0.22
GDNFP39905 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.43■□□□□ 0.22
GDNFP39905 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.43■□□□□ 0.22
GDNFP39905 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
GDNFP39905 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.43■□□□□ 0.22
GDNFP39905 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GDNFP39905 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
GDNFP39905 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
GDNFP39905 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GDNFP39905 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GDNFP39905 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.42■□□□□ 0.22
GDNFP39905 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.42■□□□□ 0.22
GDNFP39905 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GDNFP39905 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.42■□□□□ 0.22
GDNFP39905 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GDNFP39905 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDNFP39905 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.42■□□□□ 0.22
GDNFP39905 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms